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GENE CARD

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Gene Card

Best human hits

ARHGAP1; ARHGAP8; PRR5-ARHGAP8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004926

Gene Model ID

KH2012:KH.C2.702

Location

KhC2:1174336..1184208

Transcript Models and Sequences

  KH2012:KH.C2.702.v1.A.SL3-1
KH2012:KH.C2.702.v1.A.SL4-1
KH2012:KH.C2.702.v1.R.ND1-1
KH2012:KH.C2.702.v2.A.ND2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000011599
NCBI Reference Sequence XM_009859255.2
Collections

Gateway full ORF

2 results

cima891943

Plate: VES70_P24

cima895416

Plate: VES71_C20

Gene collection 1 (N. Satoh)

1 result

cieg022h02

Plate: R1CiGC18p24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
RhoGAP_dom ProSiteProfiles Rho GTPase-activating protein domain
CRAL-TRIO_dom ProSiteProfiles CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf SUPERFAMILY CRAL-TRIO lipid binding domain superfamily
CRAL-TRIO_dom CDD CRAL-TRIO lipid binding domain
Rho_GTPase_activation_prot Gene3D Rho GTPase activation protein
CRAL-TRIO_dom SMART CRAL-TRIO lipid binding domain
CRAL-TRIO_dom_sf Gene3D CRAL-TRIO lipid binding domain superfamily
RhoGAP_dom SMART Rho GTPase-activating protein domain
CRAL-TRIO_dom Pfam CRAL-TRIO lipid binding domain
RhoGAP_dom Pfam Rho GTPase-activating protein domain
Rho_GTPase_activation_prot SUPERFAMILY Rho GTPase activation protein

GOSlim

26 results

GO Term Annotation Origin Type
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
signal transduction Orthology biological process
small GTPase mediated signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
regulation of GTPase activity Orthology biological process
positive regulation of GTPase activity Orthology biological process
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
endosome Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular transport Orthology biological process
enzyme binding Orthology molecular function
protein transport Orthology biological process
metal ion transport Orthology biological process
cell adhesion molecule binding Orthology molecular function
regulation of signal transduction Orthology biological process
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
transmembrane transport Orthology biological process

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SH3/SH2 adaptor activity Hs molecular function
GTPase activator activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
signal transduction Hs biological process
small GTPase mediated signal transduction Hs biological process
Rho protein signal transduction Hs biological process
positive regulation of signal transduction Hs biological process
endosome membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
endosomal transport Hs biological process
SH3 domain binding Hs molecular function
Rab GTPase binding Hs molecular function
transferrin transport Hs biological process
regulation of GTPase activity Hs biological process
positive regulation of GTPase activity Hs biological process
cadherin binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
regulation of small GTPase mediated signal transduction Hs biological process
extracellular exosome Hs cellular component
positive regulation of ERK1 and ERK2 cascade Hs biological process
sorting endosome Hs cellular component
ferric iron import across plasma membrane Hs biological process
negative regulation of endocytic recycling Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SH3/SH2 adaptor activity Hs molecular function 377 1.72e-127
GTPase activator activity Hs molecular function 377 1.72e-127
protein binding Hs molecular function 377 1.72e-127
cytoplasm Hs cellular component 377 1.72e-127
cytosol Hs cellular component 377 1.72e-127
endosome membrane Hs cellular component 377 1.72e-127
membrane Hs cellular component 377 1.72e-127
integral component of membrane Hs cellular component 377 1.72e-127
SH3 domain binding Hs molecular function 377 1.72e-127
Rab GTPase binding Hs molecular function 377 1.72e-127
cadherin binding Hs molecular function 377 1.72e-127
perinuclear region of cytoplasm Hs cellular component 377 1.72e-127
extracellular exosome Hs cellular component 377 1.72e-127
sorting endosome Hs cellular component 377 1.72e-127

GO (InterProScan)

1 result

GO Term Analysis Type e-value
signal transduction Gene3D biological process 7.6E-58

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