Aniseed - Gene card

Gene 'KH2012:KH.C2.587'

Gene Card

Best human hits

MTCH1; MTCH2; SLC25A19

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004800

Gene Model ID

KH2012:KH.C2.587

Location

KhC2:7528898..7534107

Transcript Models and Sequences

KH2012:KH.C2.587.v1.A.nonSL3-1
KH2012:KH.C2.587.v1.A.SL1-1
KH2012:KH.C2.587.v2.A.nonSL3-1
KH2012:KH.C2.587.v2.A.SL1-1
KH2012:KH.C2.587.v3.A.SL2-1
KH2012:KH.C2.587.v4.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000004967
NCBI Reference Sequence	XM_002129878.4
NCBI Reference Sequence	XM_018817450.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg022e19

Plate: R1CiGC18p12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Mitochondrial_sb/sol_carrier	Pfam	Mitochondrial substrate/solute carrier
Mitochondrial_sb/sol_carrier	ProSiteProfiles	Mitochondrial substrate/solute carrier
Mt_carrier_dom_sf	SUPERFAMILY	Mitochondrial carrier domain superfamily
Mt_carrier_dom_sf	Gene3D	Mitochondrial carrier domain superfamily

GOSlim

16 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
nucleus	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
apoptotic process	Orthology	biological process
regulation of signal transduction	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
transmembrane transport	Blast	biological process
extracellular exosome	Orthology	cellular component
endopeptidase activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
organic substance transport	Blast	biological process
cation transport	Blast	biological process

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
apoptotic process	Hs	biological process
activation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
regulation of signal transduction	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)