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GENE CARD

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Gene Card

Best human hits

CALM1; EFCAB3; SPATA21

Unique Gene ID

Cirobu.g00004293

Gene Model ID

KH2012:KH.C2.123

Location

KhC2:6170434..6174131

Transcript Models and Sequences

  KH2012:KH.C2.123.v1.A.ND1-1

External Database Gene Card
Collections

Gateway full ORF

2 results

cima85748

Plate: VES57_B01

cima864507

Plate: VES65_H10

Gene collection 1 (N. Satoh)

1 result

cicl053d03

Plate: R1CiGC14o19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
EF_hand_dom Pfam EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom ProSiteProfiles EF-hand domain
S100/CaBP-9k_CS ProSitePatterns S100/Calbindin-D9k, conserved site
EF_hand_dom SMART EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom CDD EF-hand domain

GOSlim

35 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
kinase activity Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
enzyme binding Blast molecular function
molecular function regulator Blast molecular function
microtubule Blast cellular component
phosphotransferase activity, alcohol group as acceptor Blast molecular function
ion transport Blast biological process
transmembrane transport Blast biological process
metal ion transport Blast biological process
cytoplasmic part Blast cellular component
organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
cytoskeletal protein binding Blast molecular function
protein N-terminus binding Blast molecular function
integral component of membrane Blast cellular component
enzyme activator activity Blast molecular function
protein serine/threonine kinase activity Blast molecular function
protein dephosphorylation Blast biological process
regulation of cellular metabolic process Blast biological process

GO (Orthology)

2 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
calcium ion binding Hs molecular function
metal ion binding Hs molecular function

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 50.1 2.03e-07
Ras guanyl-nucleotide exchange factor activity Hs molecular function 50.1 2.03e-07
calcium ion binding Hs molecular function 66.6 6.67e-12
protein binding Hs molecular function 50.1 2.03e-07
extracellular region Hs cellular component 50.1 2.03e-07
nucleus Hs cellular component 50.1 2.03e-07
nucleoplasm Hs cellular component 50.1 2.03e-07
cytoplasm Hs cellular component 50.1 2.03e-07
centrosome Hs cellular component 50.1 2.03e-07
spindle Hs cellular component 50.1 2.03e-07
cytosol Hs cellular component 50.1 2.03e-07
cytoskeleton Hs cellular component 50.1 2.03e-07
spindle microtubule Hs cellular component 50.1 2.03e-07
plasma membrane Hs cellular component 50.1 2.03e-07
adenylate cyclase binding Hs molecular function 50.1 2.03e-07
inositol-1,4,5-trisphosphate 3-kinase activity Hs molecular function 50.1 2.03e-07
ligand-gated ion channel activity Hs molecular function 50.1 2.03e-07
kinase activity Hs molecular function 50.1 2.03e-07
calcium channel inhibitor activity Hs molecular function 50.1 2.03e-07
protein kinase binding Hs molecular function 50.1 2.03e-07
protein domain specific binding Hs molecular function 50.1 2.03e-07
sarcomere Hs cellular component 50.1 2.03e-07
titin binding Hs molecular function 50.1 2.03e-07
vesicle Hs cellular component 50.1 2.03e-07
N-terminal myristoylation domain binding Hs molecular function 50.1 2.03e-07
macromolecular complex Hs cellular component 50.1 2.03e-07
calcium channel complex Hs cellular component 50.1 2.03e-07
protein serine/threonine kinase activator activity Hs molecular function 50.1 2.03e-07
ion channel binding Hs molecular function 50.1 2.03e-07
metal ion binding Hs molecular function 66.6 6.67e-12
extracellular exosome Hs cellular component 50.1 2.03e-07
protein phosphatase activator activity Hs molecular function 50.1 2.03e-07
disordered domain specific binding Hs molecular function 50.1 2.03e-07
catalytic complex Hs cellular component 50.1 2.03e-07

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 1.6E-8