Aniseed - Gene card

Gene 'KH2012:KH.C14.440'

Gene Card

Best human hits

TNIP1; TNIP3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003875

Gene Model ID

KH2012:KH.C14.440

Location

KhC14:4247352..4262451

Transcript Models and Sequences

KH2012:KH.C14.440.v1.B.SL4-1
KH2012:KH.C14.440.v1.R.ND1-1
KH2012:KH.C14.440.v2.A.SL2-1
KH2012:KH.C14.440.v3.A.SL3-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000010041
NCBI Reference Sequence	XM_009862577.2
NCBI Reference Sequence	XM_018814894.1
NCBI Reference Sequence	XM_018814895.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

3 results

ciad047o21

Plate: R1CiGC05k05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
CC2-LZ_dom	Pfam	NF-kappa-B essential modulator NEMO, CC2-LZ domain

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
defense response	Orthology	biological process
protein kinase binding	Orthology	molecular function
identical protein binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
signal transduction	Orthology	biological process
innate immune response	Orthology	biological process
protein metabolic process	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
protein phosphorylation	Orthology	biological process
response to lipopolysaccharide	Orthology	biological process
cellular response to organic substance	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
MyD88-dependent toll-like receptor signaling pathway	Hs	biological process
MyD88-independent toll-like receptor signaling pathway	Hs	biological process
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
translation	Hs	biological process
defense response	Hs	biological process
inflammatory response	Hs	biological process
glycoprotein biosynthetic process	Hs	biological process
protein deubiquitination	Hs	biological process
protein kinase binding	Hs	molecular function
polyubiquitin modification-dependent protein binding	Hs	molecular function
toll-like receptor 4 signaling pathway	Hs	biological process
identical protein binding	Hs	molecular function
negative regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
negative regulation of viral genome replication	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
regulation of inflammatory response	Hs	biological process
positive regulation of inflammatory response	Hs	biological process
mitogen-activated protein kinase binding	Hs	molecular function
negative regulation of ERK1 and ERK2 cascade	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process
positive regulation of protein deubiquitination	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	94.7	3.71e-20
intracellular	Hs	cellular component	94.7	3.71e-20
nucleus	Hs	cellular component	94.7	3.71e-20
nucleoplasm	Hs	cellular component	94.7	3.71e-20
cytoplasm	Hs	cellular component	94.7	3.71e-20
cytosol	Hs	cellular component	94.7	3.71e-20
protein kinase binding	Hs	molecular function	82.4	1.13e-16
polyubiquitin modification-dependent protein binding	Hs	molecular function	94.7	3.71e-20
identical protein binding	Hs	molecular function	94.7	3.71e-20
mitogen-activated protein kinase binding	Hs	molecular function	94.7	3.71e-20

GO (InterProScan)