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Gene Card

Best human hits

GBE1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003714

Gene Model ID

KH2012:KH.C14.290

Location

KhC14:1817948..1821626

Transcript Models and Sequences

  KH2012:KH.C14.290.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000005707
NCBI Reference Sequence XM_018814721.1
Collections

Gene collection 1 (N. Satoh)

2 results

citb013o11

Plate: R1CiGC30j03

cilv007l12

Plate: R1CiGC25h17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Ig-like_fold Gene3D Immunoglobulin-like fold
Branching_enzy PIRSF 1,4-alpha-glucan-branching enzyme
Branching_enzy PANTHER 1,4-alpha-glucan-branching enzyme
Glyco_hydro_b Gene3D Glycosyl hydrolase, all-beta
Glyco_hydro_13_N Pfam Glycoside hydrolase, family 13, N-terminal
A-amylase/branching_C Pfam Alpha-amylase/branching enzyme, C-terminal all beta
Glyco_hydro_13_cat_dom Pfam Glycosyl hydrolase, family 13, catalytic domain
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_13_cat_dom SMART Glycosyl hydrolase, family 13, catalytic domain

GOSlim

9 results

GO Term Annotation Origin Type
catalytic activity Blast molecular function
protein binding Blast molecular function
cytosol Blast cellular component
transferase activity Blast molecular function
cation binding Blast molecular function
extracellular exosome Blast cellular component
hydrolase activity Blast molecular function
binding Blast molecular function
organic substance metabolic process InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
catalytic activity Hs molecular function 692 0.0
1,4-alpha-glucan branching enzyme activity Hs molecular function 692 0.0
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 692 0.0
protein binding Hs molecular function 692 0.0
cytosol Hs cellular component 692 0.0
transferase activity Hs molecular function 692 0.0
transferase activity, transferring glycosyl groups Hs molecular function 692 0.0
carbohydrate binding Hs molecular function 692 0.0
cation binding Hs molecular function 692 0.0
extracellular exosome Hs cellular component 692 0.0
1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) Hs molecular function 692 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
catalytic activity Pfam molecular function 1.6E-20
1,4-alpha-glucan branching enzyme activity PANTHER molecular function 1.9E-266
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 4.9E-9
carbohydrate metabolic process Pfam biological process 1.6E-20
cation binding Pfam molecular function 1.6E-20

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