Gene Card
Best human hits
RAB1A; RAB1B; RAB8B
Unique Gene ID
Cirobu.g00001725
Gene Model ID
KH2012:KH.C10.50
Location
KhC10:4860758..4864337
Transcript Models and Sequences
KH2012:KH.C10.50.v1.A.SL1-1
KH2012:KH.C10.50.v1.A.SL2-1
KH2012:KH.C10.50.v2.A.SL1-1
KH2012:KH.C10.50.v2.A.SL2-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000023081 |
| NCBI Reference Sequence | XM_002126696.3 |
Gateway full ORF
3 results
Gene collection 1 (N. Satoh)
2 results
cieg019m21
Plate: R1CiGC18h21
ciht035b22
Plate: R1CiGC44e05
n/a
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Click here to see the tree inference method
InterPro
4 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Small_GTPase | Pfam | Small GTPase superfamily |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Small_GTP-bd_dom | TIGRFAM | Small GTP-binding protein domain |
| Sigma_54_int_dom_ATP-bd_1 | ProSitePatterns | Sigma-54 interaction domain, ATP-binding site 1 |
GOSlim
54 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| Golgi membrane | Orthology | cellular component |
| nucleotide binding | Orthology | molecular function |
| GTPase activity | Orthology | molecular function |
| receptor binding | Blast | molecular function |
| protein binding | Orthology | molecular function |
| GTP binding | Orthology | molecular function |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| mitochondrion | Orthology | cellular component |
| endosome | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| endoplasmic reticulum | Orthology | cellular component |
| endoplasmic reticulum membrane | Orthology | cellular component |
| Golgi apparatus | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| plasma membrane | Blast | cellular component |
| protein transport | Orthology | biological process |
| membrane | Orthology | cellular component |
| cell migration | Orthology | biological process |
| nuclear body | Blast | cellular component |
| cytoplasmic vesicle | Orthology | cellular component |
| melanosome | Orthology | cellular component |
| intracellular membrane-bounded organelle | Orthology | cellular component |
| perinuclear region of cytoplasm | Blast | cellular component |
| extracellular exosome | Orthology | cellular component |
| ubiquitin-like protein transferase activity | Orthology | molecular function |
| ligase activity | Orthology | molecular function |
| peptidase activity, acting on L-amino acid peptides | Orthology | molecular function |
| cytoplasmic part | Orthology | cellular component |
| intracellular transport | Orthology | biological process |
| membrane organization | Orthology | biological process |
| organelle organization | Orthology | biological process |
| endomembrane system | Orthology | cellular component |
| intracellular organelle part | Orthology | cellular component |
| whole membrane | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
| cellular process | Orthology | biological process |
| cell adhesion | Orthology | biological process |
| cell morphogenesis involved in differentiation | Orthology | biological process |
| response to bacterium | Orthology | biological process |
| defense response | Orthology | biological process |
| cellular protein modification process | Orthology | biological process |
| cell adhesion molecule binding | Orthology | molecular function |
| microtubule-based movement | Orthology | biological process |
| positive regulation of catalytic activity | Orthology | biological process |
| ubiquitin-protein transferase activity | Orthology | molecular function |
| regulation of cellular metabolic process | Orthology | biological process |
| peroxisome | Blast | cellular component |
| synapse part | Blast | cellular component |
| neuron part | Blast | cellular component |
| anion binding | Blast | molecular function |
| guanyl ribonucleotide binding | Blast | molecular function |
| purine ribonucleoside binding | Blast | molecular function |
| cell part | Blast | cellular component |
GO (Orthology)
40 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| autophagosome assembly | Hs | biological process |
| Golgi membrane | Hs | cellular component |
| nucleotide binding | Hs | molecular function |
| GTPase activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| GTP binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| mitochondrion | Hs | cellular component |
| endosome | Hs | cellular component |
| early endosome | Hs | cellular component |
| endoplasmic reticulum | Hs | cellular component |
| endoplasmic reticulum membrane | Hs | cellular component |
| endoplasmic reticulum-Golgi intermediate compartment | Hs | cellular component |
| Golgi apparatus | Hs | cellular component |
| cytosol | Hs | cellular component |
| ER to Golgi vesicle-mediated transport | Hs | biological process |
| retrograde vesicle-mediated transport, Golgi to ER | Hs | biological process |
| endocytosis | Hs | biological process |
| autophagy | Hs | biological process |
| Golgi organization | Hs | biological process |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| vesicle-mediated transport | Hs | biological process |
| cell migration | Hs | biological process |
| transport vesicle | Hs | cellular component |
| transport vesicle membrane | Hs | cellular component |
| melanosome transport | Hs | biological process |
| endoplasmic reticulum-Golgi intermediate compartment membrane | Hs | cellular component |
| pre-autophagosomal structure membrane | Hs | cellular component |
| substrate adhesion-dependent cell spreading | Hs | biological process |
| melanosome | Hs | cellular component |
| defense response to bacterium | Hs | biological process |
| post-translational protein modification | Hs | biological process |
| cadherin binding | Hs | molecular function |
| vesicle transport along microtubule | Hs | biological process |
| COPII vesicle coating | Hs | biological process |
| extracellular exosome | Hs | cellular component |
| cargo loading into COPII-coated vesicle | Hs | biological process |
| positive regulation of ubiquitin protein ligase activity | Hs | biological process |
| regulation of autophagosome assembly | Hs | biological process |
GO (Blast)
38 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 374 | 5.09e-134 |
| nucleotide binding | Hs | molecular function | 374 | 5.09e-134 |
| GTPase activity | Hs | molecular function | 374 | 5.09e-134 |
| receptor binding | Hs | molecular function | 230 | 3.63e-77 |
| protein binding | Hs | molecular function | 374 | 5.09e-134 |
| GTP binding | Hs | molecular function | 374 | 5.09e-134 |
| nucleoplasm | Hs | cellular component | 230 | 3.63e-77 |
| cytoplasm | Hs | cellular component | 374 | 5.09e-134 |
| mitochondrion | Hs | cellular component | 360 | 1.05e-128 |
| endosome | Hs | cellular component | 374 | 5.09e-134 |
| early endosome | Hs | cellular component | 374 | 5.09e-134 |
| peroxisomal membrane | Hs | cellular component | 230 | 3.63e-77 |
| endoplasmic reticulum | Hs | cellular component | 374 | 5.09e-134 |
| endoplasmic reticulum membrane | Hs | cellular component | 374 | 5.09e-134 |
| endoplasmic reticulum-Golgi intermediate compartment | Hs | cellular component | 360 | 1.05e-128 |
| Golgi apparatus | Hs | cellular component | 374 | 5.09e-134 |
| cytosol | Hs | cellular component | 374 | 5.09e-134 |
| plasma membrane | Hs | cellular component | 230 | 3.63e-77 |
| synaptic vesicle | Hs | cellular component | 230 | 3.63e-77 |
| membrane | Hs | cellular component | 374 | 5.09e-134 |
| nuclear body | Hs | cellular component | 230 | 3.63e-77 |
| GDP binding | Hs | molecular function | 230 | 3.63e-77 |
| transport vesicle | Hs | cellular component | 360 | 1.05e-128 |
| transport vesicle membrane | Hs | cellular component | 374 | 5.09e-134 |
| secretory granule membrane | Hs | cellular component | 230 | 3.63e-77 |
| phagocytic vesicle membrane | Hs | cellular component | 230 | 3.63e-77 |
| TPR domain binding | Hs | molecular function | 230 | 3.63e-77 |
| cytoplasmic vesicle | Hs | cellular component | 230 | 3.63e-77 |
| endoplasmic reticulum-Golgi intermediate compartment membrane | Hs | cellular component | 360 | 1.05e-128 |
| pre-autophagosomal structure membrane | Hs | cellular component | 360 | 1.05e-128 |
| melanosome | Hs | cellular component | 374 | 5.09e-134 |
| intracellular membrane-bounded organelle | Hs | cellular component | 230 | 3.63e-77 |
| cadherin binding | Hs | molecular function | 374 | 5.09e-134 |
| phagocytic vesicle | Hs | cellular component | 230 | 3.63e-77 |
| perinuclear region of cytoplasm | Hs | cellular component | 230 | 3.63e-77 |
| cell tip | Hs | cellular component | 230 | 3.63e-77 |
| recycling endosome membrane | Hs | cellular component | 230 | 3.63e-77 |
| extracellular exosome | Hs | cellular component | 374 | 5.09e-134 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| GTPase activity | Pfam | molecular function | 2.9E-67 |
| GTP binding | Pfam | molecular function | 2.9E-67 |
