Aniseed - Gene card

Gene 'KH2012:KH.C10.340'

Gene Card

Best human hits

CBR4; DHRS11

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001553

Gene Model ID

KH2012:KH.C10.340

Location

KhC10:2935777..2937482

Transcript Models and Sequences

KH2012:KH.C10.340.v1.A.nonSL2-1
KH2012:KH.C10.340.v1.A.SL1-1
KH2012:KH.C10.340.v1.A.SL3-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004633
NCBI Reference Sequence	XM_018813601.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad053h01

Plate: R1CiGC05h13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
SDR_fam	PRINTS	Short-chain dehydrogenase/reductase SDR
Sc_DH/Rdtase_CS	ProSitePatterns	Short-chain dehydrogenase/reductase, conserved site
SDR_fam	Pfam	Short-chain dehydrogenase/reductase SDR
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily

GOSlim

14 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Blast	molecular function
extracellular region	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial matrix	Blast	cellular component
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process
cofactor binding	Blast	molecular function
anion binding	Blast	molecular function
coenzyme binding	Blast	molecular function
macromolecular complex	Blast	cellular component
cell part	Blast	cellular component

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
3-keto sterol reductase activity	Hs	molecular function
estradiol 17-beta-dehydrogenase activity	Hs	molecular function
extracellular region	Hs	cellular component
lipid metabolic process	Hs	biological process
steroid biosynthetic process	Hs	biological process
estrogen biosynthetic process	Hs	biological process
steroid metabolic process	Hs	biological process
oxidoreductase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process
17-beta-ketosteroid reductase activity	Hs	molecular function
17-beta-hydroxysteroid dehydrogenase (NADP+) activity	Hs	molecular function

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	280	1.42e-95
3-keto sterol reductase activity	Hs	molecular function	280	1.42e-95
NAD(P)H dehydrogenase (quinone) activity	Hs	molecular function	88.2	6.26e-21
estradiol 17-beta-dehydrogenase activity	Hs	molecular function	280	1.42e-95
protein binding	Hs	molecular function	88.2	6.26e-21
extracellular region	Hs	cellular component	280	1.42e-95
mitochondrion	Hs	cellular component	88.2	6.26e-21
mitochondrial matrix	Hs	cellular component	88.2	6.26e-21
NADPH dehydrogenase (quinone) activity	Hs	molecular function	88.2	6.26e-21
oxidoreductase activity	Hs	molecular function	280	1.42e-95
3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity	Hs	molecular function	88.2	6.26e-21
quinone binding	Hs	molecular function	88.2	6.26e-21
NADPH binding	Hs	molecular function	88.2	6.26e-21
17-beta-ketosteroid reductase activity	Hs	molecular function	280	1.42e-95
17-beta-hydroxysteroid dehydrogenase (NADP+) activity	Hs	molecular function	280	1.42e-95
oxidoreductase complex	Hs	cellular component	88.2	6.26e-21

GO (InterProScan)