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GENE CARD

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  1. Gene 'KH2012:KH.C10.223'

Gene Card

Best human hits

B9D2; MKS1

Unique Gene ID

Cirobu.g00001427

Gene Model ID

KH2012:KH.C10.223

Location

KhC10:2070843..2082028

Transcript Models and Sequences

  KH2012:KH.C10.223.v1.A.SL1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

4 results

cien29530

Plate: VES74_A24

cien36110

Plate: VES76_B03

cien36878

Plate: VES76_N05

cien94398

Plate: VES85_F03

Gene collection 1 (N. Satoh)

3 results

cicl001j04

Plate: R1CiGC08o21

cign065i19

Plate: R1CiGC42h06

cinc001g17

Plate: R1CiGC44p05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
B9_dom Pfam B9 domain
B9_dom PANTHER B9 domain
B9_dom ProSiteProfiles B9 domain

GOSlim

28 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Blast cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
membrane Orthology cellular component
cell projection organization Orthology biological process
cell projection Orthology cellular component
head development Orthology biological process
regulation of canonical Wnt signaling pathway Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
nervous system development Orthology biological process
cytoplasmic part Orthology cellular component
organelle Orthology cellular component
plasma membrane region Orthology cellular component
macromolecular complex Orthology cellular component
multicellular organism development Orthology biological process
cell surface receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
organelle part Orthology cellular component
cell projection part Orthology cellular component
system development Orthology biological process
anatomical structure morphogenesis Orthology biological process
neuron projection development Orthology biological process
animal organ development Orthology biological process
tubulin binding Blast molecular function

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
neural tube closure Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
centrosome Hs cellular component
centriole Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
cilium Hs cellular component
determination of left/right symmetry Hs biological process
regulation of smoothened signaling pathway Hs biological process
epithelial structure maintenance Hs biological process
membrane Hs cellular component
cell projection organization Hs biological process
ciliary transition zone Hs cellular component
MKS complex Hs cellular component
ciliary basal body Hs cellular component
cell projection Hs cellular component
motile cilium assembly Hs biological process
embryonic skeletal system development Hs biological process
branching morphogenesis of an epithelial tube Hs biological process
inner ear receptor stereocilium organization Hs biological process
cilium assembly Hs biological process
head development Hs biological process
regulation of canonical Wnt signaling pathway Hs biological process
common bile duct development Hs biological process
non-motile cilium assembly Hs biological process
embryonic brain development Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 392 2.39e-130
nucleus Hs cellular component 74.7 1.30e-15
cytoplasm Hs cellular component 392 2.39e-130
centrosome Hs cellular component 392 2.39e-130
centriole Hs cellular component 392 2.39e-130
microtubule organizing center Hs cellular component 392 2.39e-130
cytosol Hs cellular component 392 2.39e-130
cytoskeleton Hs cellular component 392 2.39e-130
cilium Hs cellular component 392 2.39e-130
membrane Hs cellular component 392 2.39e-130
ciliary transition zone Hs cellular component 392 2.39e-130
MKS complex Hs cellular component 392 2.39e-130
ciliary basal body Hs cellular component 392 2.39e-130
cell projection Hs cellular component 392 2.39e-130
gamma-tubulin binding Hs molecular function 74.7 1.30e-15

GO (InterProScan)

No result

GO Term Analysis Type e-value