Aniseed - Gene card

Gene 'KH2012:KH.C1.901'

Gene Card

Best human hits

CALU; RCN1; RCN3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001187

Gene Model ID

KH2012:KH.C1.901

Location

KhC1:2720445..2722310

Transcript Models and Sequences

KH2012:KH.C1.901.v1.A.nonSL2-1
KH2012:KH.C1.901.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000003878

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cinc001p08

Plate: R1CiGC44p19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_hand_dom	Pfam	EF-hand domain
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
Calumenin	PANTHER	Calumenin
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site
EF_hand_dom	SMART	EF-hand domain

GOSlim

11 results

GO Term	Annotation Origin	Type
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
membrane	Orthology	cellular component
melanosome	Orthology	cellular component
metal ion binding	Orthology	molecular function
cellular protein modification process	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
Golgi apparatus	Hs	cellular component
membrane	Hs	cellular component
sarcoplasmic reticulum	Hs	cellular component
sarcoplasmic reticulum lumen	Hs	cellular component
melanosome	Hs	cellular component
post-translational protein modification	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
calcium ion binding	Hs	molecular function	315	2.75e-107
protein binding	Hs	molecular function	315	2.75e-107
extracellular region	Hs	cellular component	315	2.75e-107
endoplasmic reticulum	Hs	cellular component	315	2.75e-107
endoplasmic reticulum lumen	Hs	cellular component	315	2.75e-107
endoplasmic reticulum membrane	Hs	cellular component	315	2.75e-107
Golgi apparatus	Hs	cellular component	315	2.75e-107
membrane	Hs	cellular component	315	2.75e-107
sarcoplasmic reticulum	Hs	cellular component	315	2.75e-107
sarcoplasmic reticulum lumen	Hs	cellular component	315	2.75e-107
melanosome	Hs	cellular component	315	2.75e-107
metal ion binding	Hs	molecular function	315	2.75e-107

GO (InterProScan)