Aniseed - Gene card

Gene Card

Best human hits

SURF1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001157

Gene Model ID

KH2012:KH.C1.875

Location

KhC1:1111228..1112462

Transcript Models and Sequences

KH2012:KH.C1.875.v1.A.nonSL2-1
KH2012:KH.C1.875.v1.A.nonSL3-1
KH2012:KH.C1.875.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000002691
NCBI Reference Sequence	XM_002126289.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg019e13

Plate: R1CiGC18m20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Surf1/Shy1	CDD	Surfeit locus 1/Shy1
Surf1/Shy1	Pfam	Surfeit locus 1/Shy1
Surf1/Shy1	ProSiteProfiles	Surfeit locus 1/Shy1

GOSlim

14 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
transmembrane transport	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
membrane part	Orthology	cellular component
phosphorylation	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
organelle organization	Orthology	biological process

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytochrome-c oxidase activity	Hs	molecular function
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial respiratory chain	Hs	cellular component
oxidative phosphorylation	Hs	biological process
ATP biosynthetic process	Hs	biological process
respiratory chain complex IV assembly	Hs	biological process
aerobic respiration	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
electron transport chain	Hs	biological process
mitochondrial respiratory chain complex IV assembly	Hs	biological process
oxidation-reduction process	Hs	biological process
hydrogen ion transmembrane transport	Hs	biological process

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytochrome-c oxidase activity	Hs	molecular function	295	4.24e-100
protein binding	Hs	molecular function	295	4.24e-100
mitochondrion	Hs	cellular component	295	4.24e-100
mitochondrial inner membrane	Hs	cellular component	295	4.24e-100
mitochondrial respiratory chain	Hs	cellular component	295	4.24e-100
membrane	Hs	cellular component	295	4.24e-100
integral component of membrane	Hs	cellular component	295	4.24e-100

GO (InterProScan)