Aniseed - Gene card

Gene 'KH2012:KH.C1.19'

Gene Card

Best human hits

ANKMY2; ANKRD39; TANC2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000403

Gene Model ID

KH2012:KH.C1.19

Location

KhC1:6907806..6913135

Transcript Models and Sequences

KH2012:KH.C1.19.v1.A.nonSL3-1
KH2012:KH.C1.19.v1.A.nonSL4-1
KH2012:KH.C1.19.v1.A.nonSL5-1
KH2012:KH.C1.19.v1.A.SL1-1
KH2012:KH.C1.19.v1.A.SL2-1
KH2012:KH.C1.19.v2.A.nonSL3-1
KH2012:KH.C1.19.v2.A.nonSL4-1
KH2012:KH.C1.19.v2.A.nonSL5-1
KH2012:KH.C1.19.v2.A.SL1-1
KH2012:KH.C1.19.v2.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001939
NCBI Reference Sequence	XM_002125002.4

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

2 results

cicl019d08

Plate: R1CiGC10h14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Ankyrin_rpt-contain_dom	ProSiteProfiles	Ankyrin repeat-containing domain
Ankyrin_rpt	ProSiteProfiles	Ankyrin repeat
Ankyrin_rpt-contain_dom	Pfam	Ankyrin repeat-containing domain
Ankyrin_rpt	PRINTS	Ankyrin repeat
Znf_MYND	ProSitePatterns	Zinc finger, MYND-type
Ankyrin_rpt	SMART	Ankyrin repeat
Znf_MYND	ProSiteProfiles	Zinc finger, MYND-type
Ankyrin_rpt-contain_sf	Gene3D	Ankyrin repeat-containing domain superfamily
Ankyrin_rpt-contain_sf	SUPERFAMILY	Ankyrin repeat-containing domain superfamily
Znf_MYND	Pfam	Zinc finger, MYND-type
Ankyrin_rpt-contain_dom	CDD	Ankyrin repeat-containing domain

GOSlim

9 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
enzyme binding	Orthology	molecular function
cell projection	Orthology	cellular component
metal ion binding	Orthology	molecular function
organelle	Orthology	cellular component
plasma membrane region	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
cilium	Hs	cellular component
regulation of smoothened signaling pathway	Hs	biological process
enzyme binding	Hs	molecular function
cell projection	Hs	cellular component
metal ion binding	Hs	molecular function

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	277	3.87e-90
cilium	Hs	cellular component	277	3.87e-90
enzyme binding	Hs	molecular function	277	3.87e-90
cell projection	Hs	cellular component	277	3.87e-90
metal ion binding	Hs	molecular function	277	3.87e-90

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	3.0E-5