Aniseed - Gene card

Gene 'KH2012:KH.C1.133'

Gene Card

Best human hits

CALU; RCN1; RCN3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000341

Gene Model ID

KH2012:KH.C1.133

Location

KhC1:2000294..2001976

Transcript Models and Sequences

KH2012:KH.C1.133.v1.A.SL1-1
KH2012:KH.C1.133.v2.A.nonSL3-1
KH2012:KH.C1.133.v2.A.nonSL4-1
KH2012:KH.C1.133.v2.A.SL1-1
KH2012:KH.C1.133.v2.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000013787

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

citb035h24

Plate: R1CiGC32o17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
EF_hand_dom	SMART	EF-hand domain
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_hand_dom	Pfam	EF-hand domain
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair

GOSlim

11 results

GO Term	Annotation Origin	Type
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
membrane	Orthology	cellular component
melanosome	Orthology	cellular component
metal ion binding	Orthology	molecular function
cellular protein modification process	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
Golgi apparatus	Hs	cellular component
membrane	Hs	cellular component
sarcoplasmic reticulum	Hs	cellular component
sarcoplasmic reticulum lumen	Hs	cellular component
melanosome	Hs	cellular component
post-translational protein modification	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
calcium ion binding	Hs	molecular function	325	1.74e-111
protein binding	Hs	molecular function	325	1.74e-111
extracellular region	Hs	cellular component	325	1.74e-111
endoplasmic reticulum	Hs	cellular component	325	1.74e-111
endoplasmic reticulum lumen	Hs	cellular component	325	1.74e-111
endoplasmic reticulum membrane	Hs	cellular component	325	1.74e-111
Golgi apparatus	Hs	cellular component	325	1.74e-111
membrane	Hs	cellular component	325	1.74e-111
sarcoplasmic reticulum	Hs	cellular component	325	1.74e-111
sarcoplasmic reticulum lumen	Hs	cellular component	325	1.74e-111
melanosome	Hs	cellular component	325	1.74e-111
metal ion binding	Hs	molecular function	325	1.74e-111

GO (InterProScan)