Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

PAK1IP1; TAF5L; WDR5B

Species

H.roretzi

Unique Gene ID

Harore.g00008611

Gene Model ID

Harore.CG.MTP2014.S92.g08611

Location

S92:236126..237419

Transcript Models and Sequences

  Harore.CG.MTP2014.S92.g08611.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40_repeat Pfam WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat SMART WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily

GOSlim

19 results

GO Term Annotation Origin Type
transcription factor activity, sequence-specific DNA binding Blast molecular function
transcription coactivator activity Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
cell proliferation Orthology biological process
negative regulation of signal transduction Orthology biological process
nuclear speck Blast cellular component
anatomical structure development Orthology biological process
organelle organization Blast biological process
transferase activity Blast molecular function
cellular protein modification process Blast biological process
nucleoplasm part Blast cellular component
macromolecular complex Blast cellular component
cell projection part Blast cellular component
plasma membrane region Blast cellular component
microtubule organizing center Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cell proliferation Hs biological process
negative regulation of signal transduction Hs biological process
ribosome biogenesis Hs biological process
ribosomal large subunit biogenesis Hs biological process
palate development Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription factor activity, sequence-specific DNA binding Hs molecular function 68.2 1.38e-12
transcription coactivator activity Hs molecular function 68.2 1.38e-12
histone acetyltransferase activity Hs molecular function 68.2 1.38e-12
protein binding Hs molecular function 199 6.92e-61
nucleus Hs cellular component 199 6.92e-61
nucleolus Hs cellular component 199 6.92e-61
nuclear speck Hs cellular component 68.2 1.38e-12
STAGA complex Hs cellular component 68.2 1.38e-12
transcription factor TFTC complex Hs cellular component 68.2 1.38e-12
ciliary basal body Hs cellular component 61.6 1.10e-10
cytoplasmic ribonucleoprotein granule Hs cellular component 68.2 1.38e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 3.33E-43