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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

DDX18; DDX31; DDX55

Species

H.roretzi

Unique Gene ID

Harore.g00013344

Gene Model ID

Harore.CG.MTP2014.S73.g13344

Location

S73:8471..11404

Transcript Models and Sequences

  Harore.CG.MTP2014.S73.g13344.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_C Pfam Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
DUF4217 Pfam Domain of unknown function DUF4217
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
DUF4217 SMART Domain of unknown function DUF4217
Helicase_C CDD Helicase, C-terminal

GOSlim

15 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
membrane Blast cellular component
hydrolase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 503 6.15e-167
nucleic acid binding Hs molecular function 503 6.15e-167
RNA binding Hs molecular function 503 6.15e-167
ATP-dependent RNA helicase activity Hs molecular function 503 6.15e-167
helicase activity Hs molecular function 503 6.15e-167
protein binding Hs molecular function 503 6.15e-167
ATP binding Hs molecular function 503 6.15e-167
nucleus Hs cellular component 503 6.15e-167
chromosome Hs cellular component 283 5.51e-85
nucleolus Hs cellular component 503 6.15e-167
cytoplasm Hs cellular component 503 6.15e-167
Golgi apparatus Hs cellular component 503 6.15e-167
cytosol Hs cellular component 225 3.35e-64
membrane Hs cellular component 283 5.51e-85
hydrolase activity Hs molecular function 503 6.15e-167
intracellular membrane-bounded organelle Hs cellular component 503 6.15e-167

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.1E-47
ATP binding Pfam molecular function 2.1E-47