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GENE CARD

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Gene Card

Best human hits

EDC4

Species

H.roretzi

Unique Gene ID

Harore.g00005942

Gene Model ID

Harore.CG.MTP2014.S49.g05942

Location

S49:36246..49570

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
EDC4_WD40 Pfam Enhancer of mRNA-decapping protein 4, WD40 repeat region
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain

GOSlim

10 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
membrane Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
nuclear-transcribed mRNA catabolic process Orthology biological process

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
P-body Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
membrane Hs cellular component
deadenylation-independent decapping of nuclear-transcribed mRNA Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 347 2.90e-98
protein binding Hs molecular function 347 2.90e-98
nucleus Hs cellular component 347 2.90e-98
nucleoplasm Hs cellular component 347 2.90e-98
cytoplasm Hs cellular component 347 2.90e-98
cytosol Hs cellular component 347 2.90e-98
membrane Hs cellular component 347 2.90e-98
cytoplasmic ribonucleoprotein granule Hs cellular component 347 2.90e-98

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 2.85E-19