Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RAB1A; RAB1B; RAB8B

Species

H.roretzi

Unique Gene ID

Harore.g00012310

Gene Model ID

Harore.CG.MTP2014.S47.g12310

Location

S47:185478..189179

Transcript Models and Sequences

  Harore.CG.MTP2014.S47.g12310.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
Small_GTPase Pfam Small GTPase superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

54 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
receptor binding Blast molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Blast cellular component
protein transport Orthology biological process
membrane Orthology cellular component
cell migration Orthology biological process
nuclear body Blast cellular component
cytoplasmic vesicle Orthology cellular component
melanosome Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Orthology cellular component
ubiquitin-like protein transferase activity Orthology molecular function
ligase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cytoplasmic part Orthology cellular component
intracellular transport Orthology biological process
membrane organization Orthology biological process
organelle organization Orthology biological process
endomembrane system Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cellular process Orthology biological process
cell adhesion Orthology biological process
cell morphogenesis involved in differentiation Orthology biological process
response to bacterium Orthology biological process
defense response Orthology biological process
cellular protein modification process Orthology biological process
cell adhesion molecule binding Orthology molecular function
microtubule-based movement Orthology biological process
positive regulation of catalytic activity Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
peroxisome Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component
anion binding Blast molecular function
guanyl ribonucleotide binding Blast molecular function
purine ribonucleoside binding Blast molecular function
cell part Blast cellular component

GO (Orthology)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
Golgi membrane Hs cellular component
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
cytoplasm Hs cellular component
mitochondrion Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
endocytosis Hs biological process
autophagy Hs biological process
Golgi organization Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
cell migration Hs biological process
transport vesicle Hs cellular component
transport vesicle membrane Hs cellular component
melanosome transport Hs biological process
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component
pre-autophagosomal structure membrane Hs cellular component
substrate adhesion-dependent cell spreading Hs biological process
melanosome Hs cellular component
defense response to bacterium Hs biological process
post-translational protein modification Hs biological process
cadherin binding Hs molecular function
vesicle transport along microtubule Hs biological process
COPII vesicle coating Hs biological process
extracellular exosome Hs cellular component
cargo loading into COPII-coated vesicle Hs biological process
positive regulation of ubiquitin protein ligase activity Hs biological process
regulation of autophagosome assembly Hs biological process

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 296 6.32e-104
nucleotide binding Hs molecular function 296 6.32e-104
GTPase activity Hs molecular function 296 6.32e-104
receptor binding Hs molecular function 168 1.31e-53
protein binding Hs molecular function 296 6.32e-104
GTP binding Hs molecular function 296 6.32e-104
nucleoplasm Hs cellular component 168 1.31e-53
cytoplasm Hs cellular component 296 6.32e-104
mitochondrion Hs cellular component 284 2.57e-99
endosome Hs cellular component 296 6.32e-104
early endosome Hs cellular component 296 6.32e-104
peroxisomal membrane Hs cellular component 168 1.31e-53
endoplasmic reticulum Hs cellular component 296 6.32e-104
endoplasmic reticulum membrane Hs cellular component 296 6.32e-104
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 284 2.57e-99
Golgi apparatus Hs cellular component 296 6.32e-104
cytosol Hs cellular component 296 6.32e-104
plasma membrane Hs cellular component 168 1.31e-53
synaptic vesicle Hs cellular component 168 1.31e-53
membrane Hs cellular component 296 6.32e-104
nuclear body Hs cellular component 168 1.31e-53
GDP binding Hs molecular function 168 1.31e-53
transport vesicle Hs cellular component 284 2.57e-99
transport vesicle membrane Hs cellular component 296 6.32e-104
secretory granule membrane Hs cellular component 168 1.31e-53
phagocytic vesicle membrane Hs cellular component 168 1.31e-53
TPR domain binding Hs molecular function 168 1.31e-53
cytoplasmic vesicle Hs cellular component 168 1.31e-53
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 284 2.57e-99
pre-autophagosomal structure membrane Hs cellular component 284 2.57e-99
melanosome Hs cellular component 296 6.32e-104
intracellular membrane-bounded organelle Hs cellular component 168 1.31e-53
cadherin binding Hs molecular function 296 6.32e-104
phagocytic vesicle Hs cellular component 168 1.31e-53
perinuclear region of cytoplasm Hs cellular component 168 1.31e-53
cell tip Hs cellular component 168 1.31e-53
recycling endosome membrane Hs cellular component 168 1.31e-53
extracellular exosome Hs cellular component 296 6.32e-104

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 3.6E-42
GTP binding Pfam molecular function 3.6E-42