Aniseed - Gene card

Gene 'Harore.CG.MTP2014.S4...'

Gene Card

Best human hits

MEX3B; MEX3C; MEX3D

Species

H.roretzi

Unique Gene ID

Harore.g00002162

Gene Model ID

Harore.CG.MTP2014.S447.g02162

Location

S447:71126..78325

Transcript Models and Sequences

Harore.CG.MTP2014.S447.g02162.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
KH_dom	SMART	K Homology domain
Znf_RING	SMART	Zinc finger, RING-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
KH_dom_type_1_sf	Gene3D	K Homology domain, type 1 superfamily
KH_dom_type_1_sf	SUPERFAMILY	K Homology domain, type 1 superfamily
KH_dom_type_1	Pfam	K Homology domain, type 1

GOSlim

18 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
protein phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
protein autophosphorylation	Orthology	biological process
metal ion binding	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
regulation of gene expression	Orthology	biological process
mRNA catabolic process	Orthology	biological process

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
P-body	Hs	cellular component
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
protein phosphorylation	Hs	biological process
mRNA localization resulting in posttranscriptional regulation of gene expression	Hs	biological process
transferase activity	Hs	molecular function
AU-rich element binding	Hs	molecular function
protein autophosphorylation	Hs	biological process
metal ion binding	Hs	molecular function
perinuclear region of cytoplasm	Hs	cellular component
mRNA destabilization	Hs	biological process
energy homeostasis	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
P-body	Hs	cellular component	318	1.85e-100
nucleic acid binding	Hs	molecular function	318	1.85e-100
RNA binding	Hs	molecular function	318	1.85e-100
calcium ion binding	Hs	molecular function	318	1.85e-100
protein binding	Hs	molecular function	289	2.50e-88
nucleus	Hs	cellular component	318	1.85e-100
nucleoplasm	Hs	cellular component	318	1.85e-100
cytoplasm	Hs	cellular component	318	1.85e-100
cytosol	Hs	cellular component	318	1.85e-100
transferase activity	Hs	molecular function	289	2.50e-88
AU-rich element binding	Hs	molecular function	289	2.42e-88
metal ion binding	Hs	molecular function	318	1.85e-100
perinuclear region of cytoplasm	Hs	cellular component	289	2.42e-88

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	1.9E-16
RNA binding	Gene3D	molecular function	2.9E-21