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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

KHDC4; QKI

Species

H.roretzi

Unique Gene ID

Harore.g00016043

Gene Model ID

Harore.CG.MTP2014.S391.g16043

Location

S391:12840..17040

Transcript Models and Sequences

  Harore.CG.MTP2014.S391.g16043.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
RIK/BLOM7 PANTHER KH domain containing protein RIK/BLOM7
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily

GOSlim

10 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mRNA processing Orthology biological process
RNA splicing Orthology biological process
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
mRNA splicing, via spliceosome Orthology biological process

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
spliceosomal complex Hs cellular component
cytoplasm Hs cellular component
mRNA splice site selection Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 38.5 0.009
RNA binding Hs molecular function 178 1.17e-48
mRNA binding Hs molecular function 38.5 0.009
protein binding Hs molecular function 178 1.17e-48
nucleus Hs cellular component 178 1.17e-48
spliceosomal complex Hs cellular component 178 1.17e-48
cytoplasm Hs cellular component 178 1.17e-48
SH3 domain binding Hs molecular function 38.5 0.009

GO (InterProScan)

2 results

GO Term Analysis Type e-value
RNA binding PANTHER molecular function 6.0E-72
nucleus PANTHER cellular component 6.0E-72