Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LHCGR; SORL1; TSHR

Species

H.roretzi

Unique Gene ID

Harore.g00006750

Gene Model ID

Harore.CG.MTP2014.S38.g06750

Location

S38:327986..334818

Transcript Models and Sequences

  Harore.CG.MTP2014.S38.g06750.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
GPCR_Rhodpsn Pfam G protein-coupled receptor, rhodopsin-like
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
TSHR/LHCGR/FSHR PANTHER TSH/LHCG/FSH receptor
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
GPCR_Rhodpsn_7TM ProSiteProfiles GPCR, rhodopsin-like, 7TM

GOSlim

35 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
intracellular Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
G-protein coupled receptor signaling pathway Blast biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
macromolecular complex binding Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
signaling receptor activity Blast molecular function
multicellular organismal reproductive process Blast biological process
animal organ development Blast biological process
membrane organization Blast biological process
organelle organization Blast biological process
nuclear envelope Blast cellular component
intracellular organelle lumen Blast cellular component
Golgi apparatus part Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component
enzyme binding Blast molecular function
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 101 1.75e-21
amyloid-beta binding Hs molecular function 101 1.75e-21
signal transducer activity Hs molecular function 93.6 2.01e-19
receptor activity Hs molecular function 89.7 3.58e-18
transmembrane signaling receptor activity Hs molecular function 101 1.75e-21
G-protein coupled receptor activity Hs molecular function 93.6 2.01e-19
follicle-stimulating hormone receptor activity Hs molecular function 93.6 2.01e-19
luteinizing hormone receptor activity Hs molecular function 93.6 2.01e-19
thyroid-stimulating hormone receptor activity Hs molecular function 89.7 3.58e-18
low-density lipoprotein receptor activity Hs molecular function 101 1.75e-21
protein binding Hs molecular function 101 1.75e-21
extracellular region Hs cellular component 101 1.75e-21
extracellular space Hs cellular component 101 1.75e-21
intracellular Hs cellular component 89.7 3.58e-18
nuclear envelope lumen Hs cellular component 101 1.75e-21
endosome Hs cellular component 101 1.75e-21
early endosome Hs cellular component 101 1.75e-21
endoplasmic reticulum Hs cellular component 101 1.75e-21
Golgi apparatus Hs cellular component 101 1.75e-21
trans-Golgi network Hs cellular component 101 1.75e-21
plasma membrane Hs cellular component 93.6 2.01e-19
integral component of plasma membrane Hs cellular component 101 1.75e-21
G-protein coupled peptide receptor activity Hs molecular function 93.6 2.01e-19
cell surface Hs cellular component 89.7 3.58e-18
endosome membrane Hs cellular component 101 1.75e-21
membrane Hs cellular component 101 1.75e-21
integral component of membrane Hs cellular component 101 1.75e-21
basolateral plasma membrane Hs cellular component 89.7 3.58e-18
protein-hormone receptor activity Hs molecular function 93.6 2.01e-19
low-density lipoprotein particle binding Hs molecular function 101 1.75e-21
ADP-ribosylation factor binding Hs molecular function 101 1.75e-21
Golgi cisterna Hs cellular component 101 1.75e-21
low-density lipoprotein particle Hs cellular component 101 1.75e-21
choriogonadotropin hormone receptor activity Hs molecular function 93.6 2.01e-19
choriogonadotropin hormone binding Hs molecular function 93.6 2.01e-19
receptor complex Hs cellular component 89.7 3.58e-18
macromolecular complex binding Hs molecular function 89.7 3.58e-18
recycling endosome Hs cellular component 101 1.75e-21
extracellular exosome Hs cellular component 101 1.75e-21

GO (InterProScan)

4 results

GO Term Analysis Type e-value
G-protein coupled receptor activity Pfam molecular function 3.0E-11
protein binding PRINTS molecular function 9.8E-19
G-protein coupled receptor signaling pathway Pfam biological process 3.0E-11
integral component of membrane Pfam cellular component 3.0E-11