Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Oxoglu/Fe-dep_dioxygenase	ProSiteProfiles	Oxoglutarate/iron-dependent dioxygenase
Pro_4_hyd_alph	SMART	Prolyl 4-hydroxylase, alpha subunit
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
TPR_repeat	ProSiteProfiles	Tetratricopeptide repeat
Oxoglu/Fe-dep_dioxygenase	Pfam	Oxoglutarate/iron-dependent dioxygenase
Pro_4_hyd_alph_N	Pfam	Prolyl 4-hydroxylase alpha-subunit, N-terminal
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain

GOSlim

21 results

GO Term	Annotation Origin	Type
iron ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
cytosol	Orthology	cellular component
membrane	Orthology	cellular component
identical protein binding	Orthology	molecular function
intracellular membrane-bounded organelle	Orthology	cellular component
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
macromolecular complex	Orthology	cellular component
cellular metabolic process	Orthology	biological process
endoplasmic reticulum part	Orthology	cellular component
extracellular matrix organization	Orthology	biological process
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
procollagen-proline 4-dioxygenase activity	Hs	molecular function
iron ion binding	Hs	molecular function
protein binding	Hs	molecular function
collagen trimer	Hs	cellular component
nucleoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
cytosol	Hs	cellular component
electron carrier activity	Hs	molecular function
membrane	Hs	cellular component
procollagen-proline 4-dioxygenase complex	Hs	cellular component
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Hs	molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Hs	molecular function
peptidyl-proline hydroxylation to 4-hydroxy-L-proline	Hs	biological process
peptidyl-proline hydroxylation	Hs	biological process
electron transport chain	Hs	biological process
collagen fibril organization	Hs	biological process
L-ascorbic acid binding	Hs	molecular function
identical protein binding	Hs	molecular function
intracellular membrane-bounded organelle	Hs	cellular component
metal ion binding	Hs	molecular function
dioxygenase activity	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
procollagen-proline 4-dioxygenase activity	Hs	molecular function	496	5.85e-172
iron ion binding	Hs	molecular function	496	5.85e-172
protein binding	Hs	molecular function	496	5.85e-172
collagen trimer	Hs	cellular component	496	1.17e-171
nucleoplasm	Hs	cellular component	496	5.85e-172
mitochondrion	Hs	cellular component	496	1.17e-171
endoplasmic reticulum	Hs	cellular component	496	5.85e-172
endoplasmic reticulum lumen	Hs	cellular component	496	5.85e-172
cytosol	Hs	cellular component	496	5.85e-172
electron carrier activity	Hs	molecular function	496	5.85e-172
membrane	Hs	cellular component	496	1.17e-171
procollagen-proline 4-dioxygenase complex	Hs	cellular component	496	1.17e-171
oxidoreductase activity	Hs	molecular function	496	5.85e-172
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Hs	molecular function	496	5.85e-172
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Hs	molecular function	496	5.85e-172
L-ascorbic acid binding	Hs	molecular function	496	5.85e-172
identical protein binding	Hs	molecular function	496	1.17e-171
intracellular membrane-bounded organelle	Hs	cellular component	496	5.85e-172
metal ion binding	Hs	molecular function	496	5.85e-172
dioxygenase activity	Hs	molecular function	496	5.85e-172

GO (InterProScan)

9 results

GO Term	Analysis	Type	e-value
procollagen-proline 4-dioxygenase activity	Pfam	molecular function	2.4E-40
iron ion binding	SMART	molecular function	3.1E-62
protein binding	Gene3D	molecular function	2.4E-41
endoplasmic reticulum	Pfam	cellular component	2.4E-40
oxidoreductase activity	Pfam	molecular function	3.3E-16
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Pfam	molecular function	2.4E-40
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	SMART	molecular function	3.1E-62
L-ascorbic acid binding	SMART	molecular function	3.1E-62
oxidation-reduction process	SMART	biological process	3.1E-62

Gene Card

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