- Gene 'Harore.CG.MTP2014.S2...'
Gene Card
Best human hits
PABPC4; RBM39; TRNAU1AP
Species
Unique Gene ID
Harore.g00013265
Gene Model ID
Harore.CG.MTP2014.S2354.g13265
Location
S2354:0..1713
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
GOSlim
14 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Orthology | cellular component |
| microtubule organizing center | Blast | cellular component |
| cytosol | Blast | cellular component |
| microtubule cytoskeleton | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| regulation of gene expression | Orthology | biological process |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
GO (Orthology)
6 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| selenocysteine incorporation | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| translation | Hs | biological process |
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 105 | 3.87e-28 |
| RNA binding | Hs | molecular function | 105 | 3.87e-28 |
| mRNA binding | Hs | molecular function | 56.6 | 9.33e-10 |
| protein binding | Hs | molecular function | 57.0 | 5.42e-10 |
| nucleus | Hs | cellular component | 105 | 3.87e-28 |
| nucleoplasm | Hs | cellular component | 57.0 | 5.42e-10 |
| cytoplasm | Hs | cellular component | 105 | 3.87e-28 |
| microtubule organizing center | Hs | cellular component | 57.0 | 5.42e-10 |
| cytosol | Hs | cellular component | 56.6 | 9.33e-10 |
| poly(A) binding | Hs | molecular function | 56.6 | 9.33e-10 |
| poly(U) RNA binding | Hs | molecular function | 56.6 | 9.33e-10 |
| cytoplasmic stress granule | Hs | cellular component | 56.6 | 9.33e-10 |
| microtubule cytoskeleton | Hs | cellular component | 57.0 | 5.42e-10 |
| nuclear speck | Hs | cellular component | 57.0 | 5.42e-10 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 56.6 | 9.33e-10 |
| macromolecular complex | Hs | cellular component | 57.0 | 5.42e-10 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.1E-20 |
