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GENE CARD

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Gene Card

Best human hits

CNOT7; CNOT8

Species

H.roretzi

Unique Gene ID

Harore.g00013229

Gene Model ID

Harore.CG.MTP2014.S224.g13229

Location

S224:138343..143191

Transcript Models and Sequences

  Harore.CG.MTP2014.S224.g13229.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
RNaseH_sf Gene3D Ribonuclease H superfamily
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
RNase_CAF1 Pfam Ribonuclease CAF1

GOSlim

43 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
nucleic acid binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
RNA binding Orthology molecular function
signal transducer activity Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
signal transduction Orthology biological process
transcription factor binding Orthology molecular function
positive regulation of cell proliferation Orthology biological process
negative regulation of cell proliferation Orthology biological process
negative regulation of gene expression Orthology biological process
membrane Orthology cellular component
nuclear body Orthology cellular component
nuclear speck Orthology cellular component
hydrolase activity Orthology molecular function
negative regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
RNA metabolic process Orthology biological process
nuclear-transcribed mRNA catabolic process Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
organic substance metabolic process Orthology biological process
regulation of gene expression Orthology biological process
intracellular part Orthology cellular component
cellular process Orthology biological process
cell surface receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
regulation of cellular metabolic process Orthology biological process
protein phosphorylation Orthology biological process
immune system process Orthology biological process
defense response Orthology biological process
cytokine-mediated signaling pathway Orthology biological process
negative regulation of signal transduction Orthology biological process
innate immune response Orthology biological process
mRNA catabolic process Orthology biological process

GO (Orthology)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
3'-5'-exoribonuclease activity Hs molecular function
nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
deadenylation-dependent decapping of nuclear-transcribed mRNA Hs biological process
P-body Hs cellular component
transcriptional repressor activity, RNA polymerase II transcription factor binding Hs molecular function
nucleic acid binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
RNA binding Hs molecular function
nuclease activity Hs molecular function
exonuclease activity Hs molecular function
exoribonuclease activity Hs molecular function
poly(A)-specific ribonuclease activity Hs molecular function
signal transducer activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
carbohydrate metabolic process Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of translation Hs biological process
signal transduction Hs biological process
transcription factor binding Hs molecular function
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
negative regulation of gene expression Hs biological process
membrane Hs cellular component
nuclear body Hs cellular component
nuclear speck Hs cellular component
hydrolase activity Hs molecular function
CCR4-NOT complex Hs cellular component
CCR4-NOT core complex Hs cellular component
gene silencing by RNA Hs biological process
cytoplasmic mRNA processing body assembly Hs biological process
gene silencing by miRNA Hs biological process
regulation of tyrosine phosphorylation of STAT protein Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
defense response to virus Hs biological process
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
negative regulation of type I interferon-mediated signaling pathway Hs biological process
positive regulation of mRNA catabolic process Hs biological process
host cell PML body Hs cellular component
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay Hs biological process

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
3'-5'-exoribonuclease activity Hs molecular function 395 1.63e-139
P-body Hs cellular component 395 1.63e-139
transcriptional repressor activity, RNA polymerase II transcription factor binding Hs molecular function 395 1.63e-139
nucleic acid binding Hs molecular function 395 1.63e-139
transcription factor activity, sequence-specific DNA binding Hs molecular function 395 1.63e-139
RNA binding Hs molecular function 395 1.63e-139
nuclease activity Hs molecular function 395 1.63e-139
exonuclease activity Hs molecular function 395 1.63e-139
exoribonuclease activity Hs molecular function 395 1.63e-139
poly(A)-specific ribonuclease activity Hs molecular function 395 1.63e-139
signal transducer activity Hs molecular function 395 1.63e-139
protein binding Hs molecular function 395 1.63e-139
intracellular Hs cellular component 380 1.24e-133
nucleus Hs cellular component 395 1.63e-139
cytoplasm Hs cellular component 395 1.63e-139
cytosol Hs cellular component 395 1.63e-139
transcription factor binding Hs molecular function 395 1.63e-139
membrane Hs cellular component 395 1.63e-139
nuclear body Hs cellular component 395 1.63e-139
nuclear speck Hs cellular component 395 1.63e-139
hydrolase activity Hs molecular function 395 1.63e-139
CCR4-NOT complex Hs cellular component 395 1.63e-139
CCR4-NOT core complex Hs cellular component 395 1.63e-139
metal ion binding Hs molecular function 395 1.63e-139
host cell PML body Hs cellular component 395 1.63e-139

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding Gene3D molecular function 5.5E-116

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