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GENE CARD

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Gene Card

Best human hits

TUBA1A; TUBA3C; TUBA3D

Species

H.roretzi

Unique Gene ID

Harore.g00010971

Gene Model ID

Harore.CG.MTP2014.S184.g10971

Location

S184:55981..59322

Transcript Models and Sequences

  Harore.CG.MTP2014.S184.g10971.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Alpha_tubulin PRINTS Alpha tubulin
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin PRINTS Tubulin
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin PANTHER Tubulin
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin_C Gene3D Tubulin, C-terminal
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
structural molecule activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Blast cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
microtubule-based process Orthology biological process
microtubule cytoskeleton Orthology cellular component
myelin sheath Blast cellular component
membrane raft Blast cellular component
extracellular exosome Blast cellular component
organelle organization Orthology biological process
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
endosome Blast cellular component

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cytoskeleton organization Hs biological process
microtubule-based process Hs biological process
microtubule cytoskeleton Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 861 0.0
GTPase activity Hs molecular function 861 0.0
structural molecule activity Hs molecular function 856 0.0
structural constituent of cytoskeleton Hs molecular function 861 0.0
protein binding Hs molecular function 861 0.0
GTP binding Hs molecular function 861 0.0
nucleus Hs cellular component 861 0.0
cytoplasm Hs cellular component 861 0.0
cytosol Hs cellular component 856 0.0
cytoskeleton Hs cellular component 861 0.0
microtubule Hs cellular component 861 0.0
cytoplasmic microtubule Hs cellular component 856 0.0
microtubule cytoskeleton Hs cellular component 861 0.0
protein domain specific binding Hs molecular function 856 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 856 0.0
myelin sheath Hs cellular component 856 0.0
membrane raft Hs cellular component 856 0.0
recycling endosome Hs cellular component 856 0.0
extracellular exosome Hs cellular component 856 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 5.1E-82
structural constituent of cytoskeleton PRINTS molecular function 2.2E-119
GTP binding PRINTS molecular function 2.2E-119
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0