Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
Sec7_dom	ProSiteProfiles	Sec7 domain
Sec7_dom	Pfam	Sec7 domain
Sec7_C_sf	Gene3D	Sec7, C-terminal domain superfamily
DCB_dom	Pfam	Mon2, dimerisation and cyclophilin-binding domain
Sec7_dom	SMART	Sec7 domain
Sec7_N	Pfam	Guanine nucleotide exchange factor, N-terminal
Sec7_C	Pfam	Sec7, C-terminal
Sec7_dom_sf	SUPERFAMILY	Sec7 domain superfamily

GOSlim

51 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
endosome	Orthology	cellular component
peroxisome	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
Golgi apparatus	Orthology	cellular component
microtubule organizing center	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
protein transport	Orthology	biological process
membrane	Orthology	cellular component
cell junction	Orthology	cellular component
neuron projection development	Orthology	biological process
cell leading edge	Blast	cellular component
cytoplasmic vesicle	Orthology	cellular component
intracellular signal transduction	Orthology	biological process
cell projection	Orthology	cellular component
synapse	Orthology	cellular component
perinuclear region of cytoplasm	Orthology	cellular component
regulation of molecular function	Orthology	biological process
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
enzyme binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
Golgi apparatus part	Orthology	cellular component
cell projection part	Orthology	cellular component
microtubule	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
plasma membrane region	Orthology	cellular component
nuclear lumen	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
nuclear part	Orthology	cellular component
small GTPase mediated signal transduction	Orthology	biological process
regulation of signal transduction	Orthology	biological process
organelle	Orthology	cellular component
postsynapse	Orthology	cellular component
neuron part	Orthology	cellular component
regulation of GTPase activity	Orthology	biological process
receptor binding	Orthology	molecular function
positive regulation of signal transduction	Orthology	biological process
wound healing	Orthology	biological process
anion binding	Blast	molecular function
intracellular membrane-bounded organelle	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component

GO (Orthology)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
receptor recycling	Hs	biological process
guanyl-nucleotide exchange factor activity	Hs	molecular function
ARF guanyl-nucleotide exchange factor activity	Hs	molecular function
binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
Golgi apparatus	Hs	cellular component
trans-Golgi network	Hs	cellular component
microtubule organizing center	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
axonemal microtubule	Hs	cellular component
exocytosis	Hs	biological process
Golgi to plasma membrane transport	Hs	biological process
Golgi organization	Hs	biological process
endosome organization	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
nuclear matrix	Hs	cellular component
myosin binding	Hs	molecular function
cell junction	Hs	cellular component
dendrite	Hs	cellular component
small nuclear ribonucleoprotein complex	Hs	cellular component
negative regulation of actin filament polymerization	Hs	biological process
neuron projection development	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
regulation of ARF protein signal transduction	Hs	biological process
asymmetric synapse	Hs	cellular component
symmetric synapse	Hs	cellular component
protein kinase A regulatory subunit binding	Hs	molecular function
negative regulation of GTPase activity	Hs	biological process
intracellular signal transduction	Hs	biological process
cell projection	Hs	cellular component
dendritic spine	Hs	cellular component
synapse	Hs	cellular component
perinuclear region of cytoplasm	Hs	cellular component
GABA receptor binding	Hs	molecular function
positive regulation of protein kinase B signaling	Hs	biological process
recycling endosome	Hs	cellular component
regulation of molecular function	Hs	biological process
positive regulation of wound healing	Hs	biological process
regulation of establishment of cell polarity	Hs	biological process

GO (Blast)

43 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	1877	0.0
guanyl-nucleotide exchange factor activity	Hs	molecular function	1877	0.0
ARF guanyl-nucleotide exchange factor activity	Hs	molecular function	1877	0.0
binding	Hs	molecular function	1877	0.0
protein binding	Hs	molecular function	1877	0.0
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function	221	7.72e-58
nucleus	Hs	cellular component	1753	0.0
nucleoplasm	Hs	cellular component	1753	0.0
nucleolus	Hs	cellular component	1753	0.0
cytoplasm	Hs	cellular component	1877	0.0
mitochondrion	Hs	cellular component	221	7.72e-58
endosome	Hs	cellular component	1877	0.0
peroxisome	Hs	cellular component	221	7.72e-58
endoplasmic reticulum lumen	Hs	cellular component	221	7.72e-58
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	221	7.72e-58
Golgi apparatus	Hs	cellular component	1877	0.0
Golgi stack	Hs	cellular component	221	7.72e-58
cis-Golgi network	Hs	cellular component	221	7.72e-58
trans-Golgi network	Hs	cellular component	1877	0.0
lipid droplet	Hs	cellular component	221	7.72e-58
microtubule organizing center	Hs	cellular component	1877	0.0
cytosol	Hs	cellular component	1877	0.0
cytoskeleton	Hs	cellular component	1877	0.0
axonemal microtubule	Hs	cellular component	1877	0.0
lipid binding	Hs	molecular function	221	7.72e-58
membrane	Hs	cellular component	1877	0.0
nuclear matrix	Hs	cellular component	1753	0.0
myosin binding	Hs	molecular function	1877	0.0
cell junction	Hs	cellular component	1877	0.0
dendrite	Hs	cellular component	1877	0.0
small nuclear ribonucleoprotein complex	Hs	cellular component	1753	0.0
cell leading edge	Hs	cellular component	221	7.72e-58
cytoplasmic vesicle	Hs	cellular component	1877	0.0
asymmetric synapse	Hs	cellular component	1877	0.0
symmetric synapse	Hs	cellular component	1877	0.0
protein kinase A regulatory subunit binding	Hs	molecular function	1877	0.0
cell projection	Hs	cellular component	1877	0.0
dendritic spine	Hs	cellular component	1877	0.0
synapse	Hs	cellular component	1877	0.0
perinuclear region of cytoplasm	Hs	cellular component	1877	0.0
GABA receptor binding	Hs	molecular function	1877	0.0
recycling endosome	Hs	cellular component	1877	0.0
phosphatidylinositol-3,5-bisphosphate binding	Hs	molecular function	221	7.72e-58

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
ARF guanyl-nucleotide exchange factor activity	SMART	molecular function	9.3E-93
binding	SUPERFAMILY	molecular function	2.04E-20
regulation of ARF protein signal transduction	SMART	biological process	9.3E-93

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location