Login
Help

GENE CARD

Submit your Data

  1. Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

NPHP3; TTC28

Species

H.roretzi

Unique Gene ID

Harore.g00008349

Gene Model ID

Harore.CG.MTP2014.S1583.g08349

Location

S1583:0..3925

Transcript Models and Sequences

  Harore.CG.MTP2014.S1583.g08349.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
TPR_repeat SMART Tetratricopeptide repeat
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
TPR_repeat Pfam Tetratricopeptide repeat

GOSlim

13 results

GO Term Annotation Origin Type
protein binding Blast molecular function
cytoplasm Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
kinase binding Blast molecular function
midbody Blast cellular component
cell projection Blast cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
organelle Blast cellular component
plasma membrane region Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 39.7 0.005
protein binding Hs molecular function 41.2 0.002
cytoplasm Hs cellular component 39.7 0.005
microtubule organizing center Hs cellular component 39.7 0.005
spindle Hs cellular component 39.7 0.005
cytosol Hs cellular component 41.2 0.002
cytoskeleton Hs cellular component 39.7 0.005
cilium Hs cellular component 41.2 0.002
kinase binding Hs molecular function 39.7 0.005
midbody Hs cellular component 39.7 0.005
cell projection Hs cellular component 41.2 0.002

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 4.8E-13