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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

RRP7A

Species

H.roretzi

Unique Gene ID

Harore.g00010279

Gene Model ID

Harore.CG.MTP2014.S14.g10279

Location

S14:457189..458062

Transcript Models and Sequences

  Harore.CG.MTP2014.S14.g10279.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Rrp7A_RRM CDD Rrp7A, RNA recognition motif
RRM_dom ProSiteProfiles RNA recognition motif domain
RRP7 Pfam Ribosomal RNA-processing protein 7
RRP7 PANTHER Ribosomal RNA-processing protein 7

GOSlim

9 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
RNA processing Orthology biological process
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
nucleolus Orthology cellular component

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal small subunit assembly Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
rRNA processing Hs biological process
CURI complex Hs cellular component
UTP-C complex Hs cellular component

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 204 1.27e-64
RNA binding Hs molecular function 204 1.27e-64
protein binding Hs molecular function 204 1.27e-64
nucleoplasm Hs cellular component 204 1.27e-64
cytoplasm Hs cellular component 204 1.27e-64
CURI complex Hs cellular component 204 1.27e-64
UTP-C complex Hs cellular component 204 1.27e-64

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 2.17E-7