Aniseed - Gene card

Gene 'Harore.CG.MTP2014.S1...'

Gene Card

Best human hits

CHRD; CHRDL1; CHRDL2

Species

H.roretzi

Unique Gene ID

Harore.g00002720

Gene Model ID

Harore.CG.MTP2014.S13.g02720

Location

S13:565485..570886

Transcript Models and Sequences

Harore.CG.MTP2014.S13.g02720.01.t
Harore.CG.MTP2014.S13.g02720.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
VWF_dom	ProSiteProfiles	VWFC domain
CHRD	ProSiteProfiles	CHRD
VWF_dom	ProSitePatterns	VWFC domain
VWF_dom	Pfam	VWFC domain
CHRD	Pfam	CHRD
CHRD	SMART	CHRD
Chordin	PIRSF	Chordin
VWF_dom	SMART	VWFC domain

GOSlim

21 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
central nervous system development	Orthology	biological process
cell differentiation	Orthology	biological process
system development	Orthology	biological process
anatomical structure formation involved in morphogenesis	Orthology	biological process
anion binding	Orthology	molecular function
carbohydrate derivative binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cellular response to organic substance	Orthology	biological process
animal organ development	Orthology	biological process
cell migration	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
brain development	Orthology	biological process
cell adhesion	Orthology	biological process

GO (Orthology)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
skeletal system development	Hs	biological process
osteoblast differentiation	Hs	biological process
gastrulation with mouth forming second	Hs	biological process
mesoderm formation	Hs	biological process
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
extracellular space	Hs	cellular component
multicellular organism development	Hs	biological process
pattern specification process	Hs	biological process
central nervous system development	Hs	biological process
heparin binding	Hs	molecular function
dorsal/ventral pattern formation	Hs	biological process
cytokine binding	Hs	molecular function
BMP signaling pathway involved in spinal cord dorsal/ventral patterning	Hs	biological process
negative regulation of cell migration	Hs	biological process
negative regulation of BMP signaling pathway	Hs	biological process
forebrain development	Hs	biological process
floor plate development	Hs	biological process
syndecan binding	Hs	molecular function
negative regulation of osteoblast differentiation	Hs	biological process
positive regulation of cell adhesion	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	472	3.33e-151
extracellular region	Hs	cellular component	472	3.33e-151
extracellular space	Hs	cellular component	472	3.33e-151
cytoplasm	Hs	cellular component	68.6	7.50e-12
endoplasmic reticulum lumen	Hs	cellular component	76.6	2.15e-14
heparin binding	Hs	molecular function	472	3.33e-151
cytokine binding	Hs	molecular function	472	3.33e-151
syndecan binding	Hs	molecular function	472	3.33e-151

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	9.6E-9
multicellular organism development	PIRSF	biological process	0.0