Gene Card
Best human hits
TGFBRAP1; VPS39
Species
Unique Gene ID
Harore.g00009772
Gene Model ID
Harore.CG.MTP2014.S124.g09772
Location
S124:131404..134152
Transcript Models and Sequences
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| CNH_dom | Pfam | Citron homology (CNH) domain |
| Clathrin_H-chain/VPS_repeat | Pfam | Clathrin, heavy chain/VPS, 7-fold repeat |
| Vam6/VPS39/TRAP1 | PANTHER | Vam6/VPS39/TRAP1 family |
| VPS39/TGF_beta_rcpt-assoc_2 | Pfam | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 |
| Clathrin_H-chain/VPS_repeat | ProSiteProfiles | Clathrin, heavy chain/VPS, 7-fold repeat |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| CNH_dom | ProSiteProfiles | Citron homology (CNH) domain |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Blast | molecular function |
| intracellular | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| lysosome | Blast | cellular component |
| lysosomal membrane | Blast | cellular component |
| endosome | Blast | cellular component |
| early endosome | Blast | cellular component |
| intracellular protein transport | InterProScan | biological process |
| membrane | Blast | cellular component |
| intracellular membrane-bounded organelle | Blast | cellular component |
| receptor binding | Blast | molecular function |
| cytoplasmic part | Blast | cellular component |
| membrane part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| whole membrane | Blast | cellular component |
| bounding membrane of organelle | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
16 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transforming growth factor beta receptor binding | Hs | molecular function | 544 | 1.06e-180 |
| protein binding | Hs | molecular function | 544 | 1.06e-180 |
| intracellular | Hs | cellular component | 106 | 2.21e-23 |
| cytoplasm | Hs | cellular component | 544 | 1.06e-180 |
| lysosome | Hs | cellular component | 106 | 2.21e-23 |
| lysosomal membrane | Hs | cellular component | 106 | 2.21e-23 |
| endosome | Hs | cellular component | 544 | 1.06e-180 |
| early endosome | Hs | cellular component | 544 | 1.06e-180 |
| late endosome | Hs | cellular component | 106 | 2.21e-23 |
| membrane | Hs | cellular component | 544 | 1.06e-180 |
| AP-3 adaptor complex | Hs | cellular component | 106 | 2.21e-23 |
| HOPS complex | Hs | cellular component | 106 | 2.21e-23 |
| late endosome membrane | Hs | cellular component | 106 | 2.21e-23 |
| CORVET complex | Hs | cellular component | 544 | 1.06e-180 |
| intracellular membrane-bounded organelle | Hs | cellular component | 544 | 1.06e-180 |
| SMAD binding | Hs | molecular function | 544 | 1.06e-180 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 2.64E-6 |
| intracellular protein transport | Pfam | biological process | 2.4E-7 |
| vesicle-mediated transport | PANTHER | biological process | 3.0E-162 |
