Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Aminotrans_3	CDD	Aminotransferase class-III
Aminotrans_3	ProSitePatterns	Aminotransferase class-III
PyrdxlP-dep_Trfase_dom1	Gene3D	Pyridoxal phosphate-dependent transferase domain 1
Aminotrans_3	Pfam	Aminotransferase class-III
Aminotrans_3	PIRSF	Aminotransferase class-III
PyrdxlP-dep_Trfase_major	Gene3D	Pyridoxal phosphate-dependent transferase, major domain
PyrdxlP-dep_Trfase	SUPERFAMILY	Pyridoxal phosphate-dependent transferase

GOSlim

14 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
cellular biosynthetic process	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
heterocyclic compound binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
catabolic process	Orthology	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
phosphatidylethanolamine biosynthetic process	Hs	biological process
alanine-glyoxylate transaminase activity	Hs	molecular function
transaminase activity	Hs	molecular function
transferase activity	Hs	molecular function
lyase activity	Hs	molecular function
pyridoxal phosphate binding	Hs	molecular function
collagen catabolic process	Hs	biological process
identical protein binding	Hs	molecular function
ethanolamine-phosphate phospho-lyase activity	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
catalytic activity	Hs	molecular function	504	1.39e-176
protein binding	Hs	molecular function	468	3.92e-163
mitochondrion	Hs	cellular component	504	1.39e-176
mitochondrial matrix	Hs	cellular component	504	1.39e-176
alanine-glyoxylate transaminase activity	Hs	molecular function	504	1.39e-176
transaminase activity	Hs	molecular function	504	1.39e-176
transferase activity	Hs	molecular function	504	1.39e-176
lyase activity	Hs	molecular function	504	1.39e-176
pyridoxal phosphate binding	Hs	molecular function	504	1.39e-176
identical protein binding	Hs	molecular function	504	1.39e-176
(R)-3-amino-2-methylpropionate-pyruvate transaminase activity	Hs	molecular function	275	1.02e-86
ethanolamine-phosphate phospho-lyase activity	Hs	molecular function	504	1.39e-176

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	2.5E-134
transaminase activity	CDD	molecular function	1.92976E-144
pyridoxal phosphate binding	CDD	molecular function	1.92976E-144

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location