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GENE CARD

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Gene Card

Best human hits

SDC1; SDC2; SDC4

Species

H.aurantium

Unique Gene ID

Haaura.g00002029

Gene Model ID

Haaura.CG.MTP2014.S98.g02029

Location

S98:105135..107572

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Syndecan/Neurexin_dom Pfam Syndecan/Neurexin domain
Syndecan PANTHER Syndecan
Syndecan_CS ProSitePatterns Syndecan, conserved site

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
retinoid metabolic process Hs biological process
ureteric bud development Hs biological process
neural tube closure Hs biological process
fibronectin binding Hs molecular function
protein kinase C binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
endoplasmic reticulum lumen Hs cellular component
Golgi lumen Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
focal adhesion Hs cellular component
glycosaminoglycan biosynthetic process Hs biological process
glycosaminoglycan catabolic process Hs biological process
signal transduction Hs biological process
nervous system development Hs biological process
cell surface Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
cell migration Hs biological process
cell differentiation Hs biological process
PDZ domain binding Hs molecular function
glycosaminoglycan metabolic process Hs biological process
extracellular matrix Hs cellular component
wound healing Hs biological process
identical protein binding Hs molecular function
costamere Hs cellular component
lysosomal lumen Hs cellular component
post-translational protein modification Hs biological process
membrane raft Hs cellular component
positive regulation of protein kinase activity Hs biological process
ephrin receptor signaling pathway Hs biological process
dendrite morphogenesis Hs biological process
regulation of dendrite morphogenesis Hs biological process
leukocyte migration Hs biological process
positive regulation of stress fiber assembly Hs biological process
positive regulation of focal adhesion assembly Hs biological process
inner ear receptor stereocilium organization Hs biological process
thrombospondin receptor activity Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibronectin binding Hs molecular function 62.0 2.33e-11
protein kinase C binding Hs molecular function 62.0 2.33e-11
protein binding Hs molecular function 63.5 2.35e-11
extracellular region Hs cellular component 63.5 2.35e-11
endoplasmic reticulum lumen Hs cellular component 49.7 4.14e-07
Golgi lumen Hs cellular component 63.5 2.35e-11
plasma membrane Hs cellular component 63.5 2.35e-11
integral component of plasma membrane Hs cellular component 63.5 2.35e-11
focal adhesion Hs cellular component 62.0 2.33e-11
protein C-terminus binding Hs molecular function 63.5 2.35e-11
external side of plasma membrane Hs cellular component 63.5 2.35e-11
cell surface Hs cellular component 63.5 2.35e-11
membrane Hs cellular component 63.5 2.35e-11
integral component of membrane Hs cellular component 63.5 2.35e-11
PDZ domain binding Hs molecular function 49.7 4.14e-07
extracellular matrix Hs cellular component 49.7 4.14e-07
identical protein binding Hs molecular function 63.5 2.35e-11
costamere Hs cellular component 62.0 2.33e-11
lysosomal lumen Hs cellular component 63.5 2.35e-11
membrane raft Hs cellular component 62.0 2.33e-11
thrombospondin receptor activity Hs molecular function 62.0 2.33e-11
extracellular exosome Hs cellular component 63.5 2.35e-11

GO (InterProScan)

1 result

GO Term Analysis Type e-value
membrane PANTHER cellular component 1.5E-27