Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

HNRNPL; HNRNPLL

Species

H.aurantium

Unique Gene ID

Haaura.g00001932

Gene Model ID

Haaura.CG.MTP2014.S93.g01932

Location

S93:54713..63381

Transcript Models and Sequences

  Haaura.CG.MTP2014.S93.g01932.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
HnRNP-L/PTB TIGRFAM HnRNP-L/PTB
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
regulation of alternative mRNA splicing, via spliceosome Hs biological process
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
RNA processing Hs biological process
mRNA processing Hs biological process
circadian rhythm Hs biological process
membrane Hs cellular component
RNA metabolic process Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
positive regulation of RNA splicing Hs biological process
cellular response to amino acid starvation Hs biological process
ribonucleoprotein granule Hs cellular component
transcription regulatory region DNA binding Hs molecular function
pronucleus Hs cellular component
positive regulation of translation Hs biological process
negative regulation of mRNA splicing, via spliceosome Hs biological process
perinuclear region of cytoplasm Hs cellular component
extracellular exosome Hs cellular component
pre-mRNA intronic binding Hs molecular function
response to peptide Hs biological process
mRNA CDS binding Hs molecular function
catalytic activity Hs molecular function
metabolic process Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 394 1.20e-132
RNA binding Hs molecular function 394 1.20e-132
mRNA binding Hs molecular function 328 2.04e-107
mRNA 3'-UTR binding Hs molecular function 394 1.20e-132
protein binding Hs molecular function 394 1.20e-132
nucleus Hs cellular component 394 1.20e-132
nucleoplasm Hs cellular component 394 1.20e-132
cytoplasm Hs cellular component 394 1.20e-132
cytosol Hs cellular component 394 1.20e-132
membrane Hs cellular component 394 1.20e-132
intracellular ribonucleoprotein complex Hs cellular component 394 1.20e-132
ribonucleoprotein granule Hs cellular component 394 1.20e-132
transcription regulatory region DNA binding Hs molecular function 394 1.20e-132
pronucleus Hs cellular component 394 1.20e-132
perinuclear region of cytoplasm Hs cellular component 394 1.20e-132
extracellular exosome Hs cellular component 394 1.20e-132
pre-mRNA intronic binding Hs molecular function 394 1.20e-132
mRNA CDS binding Hs molecular function 394 1.20e-132

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.24E-12
RNA binding TIGRFAM molecular function 8.9E-110
nucleus TIGRFAM cellular component 8.9E-110
mRNA processing TIGRFAM biological process 8.9E-110