Gene Card
Best human hits
SDE2; SF3A3
Species
Unique Gene ID
Haaura.g00006717
Gene Model ID
Haaura.CG.MTP2014.S800.g06717
Location
S800:14646..23601
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Matrin/U1-C_Znf_C2H2 | ProSiteProfiles | Matrin/U1-C, C2H2-type zinc finger |
| DUF3449 | Pfam | Domain of unknown function DUF3449 |
| SF3A3 | PANTHER | Splicing factor 3A subunit 3 |
| SF3a60_bindingd | Pfam | Splicing factor SF3a60 binding domain |
| SF3A3_dom | Pfam | SF3A3 domain |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA splicing, via transesterification reactions | Hs | biological process |
| mRNA 3'-splice site recognition | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| mRNA processing | Hs | biological process |
| zinc ion binding | Hs | molecular function |
| RNA splicing | Hs | biological process |
| nuclear speck | Hs | cellular component |
| metal ion binding | Hs | molecular function |
| catalytic step 2 spliceosome | Hs | cellular component |
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 674 | 0.0 |
| DNA binding | Hs | molecular function | 57.8 | 7.34e-09 |
| RNA binding | Hs | molecular function | 674 | 0.0 |
| protein binding | Hs | molecular function | 674 | 0.0 |
| nucleus | Hs | cellular component | 674 | 0.0 |
| nucleoplasm | Hs | cellular component | 674 | 0.0 |
| spliceosomal complex | Hs | cellular component | 674 | 0.0 |
| zinc ion binding | Hs | molecular function | 674 | 0.0 |
| nuclear speck | Hs | cellular component | 674 | 0.0 |
| metal ion binding | Hs | molecular function | 674 | 0.0 |
| catalytic step 2 spliceosome | Hs | cellular component | 674 | 0.0 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| mRNA splicing, via spliceosome | PANTHER | biological process | 2.1E-180 |
| nucleic acid binding | ProSiteProfiles | molecular function | 8.937 |
| RNA binding | PANTHER | molecular function | 2.1E-180 |
| nucleus | ProSiteProfiles | cellular component | 8.937 |
| spliceosomal complex | PANTHER | cellular component | 2.1E-180 |
| zinc ion binding | ProSiteProfiles | molecular function | 8.937 |
