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GENE CARD

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  1. Gene 'Haaura.CG.MTP2014.S5...'

Gene Card

Best human hits

CWC22; NOM1

Species

H.aurantium

Unique Gene ID

Haaura.g00001261

Gene Model ID

Haaura.CG.MTP2014.S52.g01261

Location

S52:43146..46951

Transcript Models and Sequences

  Haaura.CG.MTP2014.S52.g01261.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Initiation_fac_eIF4g_MI ProSiteProfiles Initiation factor eIF-4 gamma, MA3
MIF4G-like_typ-3 SMART MIF4G-like, type 3
MIF4G-like_typ-3 Pfam MIF4G-like, type 3
ARM-type_fold SUPERFAMILY Armadillo-type fold
Initiation_fac_eIF4g_MI SMART Initiation factor eIF-4 gamma, MA3
MIF4-like_sf Gene3D MIF4G-like domain superfamily
Initiation_fac_eIF4g_MI Pfam Initiation factor eIF-4 gamma, MA3

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
neurogenesis Hs biological process
ribosomal small subunit biogenesis Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 405 6.39e-129
binding Hs molecular function 405 6.39e-129
protein binding Hs molecular function 405 6.39e-129
nucleus Hs cellular component 405 6.39e-129
nucleoplasm Hs cellular component 70.9 1.91e-12
spliceosomal complex Hs cellular component 70.9 1.91e-12
nucleolus Hs cellular component 405 6.39e-129
cytosol Hs cellular component 70.9 1.91e-12
nuclear speck Hs cellular component 70.9 1.91e-12
U2-type catalytic step 1 spliceosome Hs cellular component 70.9 1.91e-12
U2-type catalytic step 2 spliceosome Hs cellular component 70.9 1.91e-12
catalytic step 2 spliceosome Hs cellular component 70.9 1.91e-12

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA binding SMART molecular function 2.1E-11
binding SUPERFAMILY molecular function 9.87E-24
protein binding SMART molecular function 2.1E-11