Aniseed - Gene card

Gene Card

Best human hits

CHL1; L1CAM; NRCAM

Species

H.aurantium

Unique Gene ID

Haaura.g00005425

Gene Model ID

Haaura.CG.MTP2014.S501.g05425

Location

S501:15248..38263

Transcript Models and Sequences

Haaura.CG.MTP2014.S501.g05425.01.t
Haaura.CG.MTP2014.S501.g05425.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
Ig-like_dom_sf	SUPERFAMILY	Immunoglobulin-like domain superfamily
FN3_dom	SMART	Fibronectin type III
Ig-like_fold	Gene3D	Immunoglobulin-like fold
Neurofascin/L1/NrCAM_C	Pfam	Neurofascin/L1/NrCAM, C-terminal domain
Ig_sub2	SMART	Immunoglobulin subtype 2
FN3_dom	CDD	Fibronectin type III
FN3_dom	ProSiteProfiles	Fibronectin type III
Ig-like_dom	ProSiteProfiles	Immunoglobulin-like domain
FN3_sf	SUPERFAMILY	Fibronectin type III superfamily
Ig_I-set	Pfam	Immunoglobulin I-set
FN3_dom	Pfam	Fibronectin type III
Ig_sub	SMART	Immunoglobulin subtype

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	408	6.77e-122
protein binding	Hs	molecular function	468	2.94e-143
extracellular region	Hs	cellular component	468	2.94e-143
proteinaceous extracellular matrix	Hs	cellular component	408	6.77e-122
plasma membrane	Hs	cellular component	468	2.94e-143
integral component of plasma membrane	Hs	cellular component	468	2.94e-143
focal adhesion	Hs	cellular component	416	1.24e-124
external side of plasma membrane	Hs	cellular component	468	2.94e-143
cell surface	Hs	cellular component	416	1.24e-124
membrane	Hs	cellular component	468	2.94e-143
integral component of membrane	Hs	cellular component	468	2.94e-143
protein domain specific binding	Hs	molecular function	416	1.24e-124
axon	Hs	cellular component	468	2.94e-143
dendrite	Hs	cellular component	416	1.24e-124
growth cone	Hs	cellular component	416	1.24e-124
ankyrin binding	Hs	molecular function	468	2.94e-143
extracellular matrix	Hs	cellular component	416	1.24e-124
cell projection	Hs	cellular component	468	2.94e-143
neuron projection	Hs	cellular component	468	2.94e-143
neuronal cell body	Hs	cellular component	416	1.24e-124
axon initial segment	Hs	cellular component	468	2.94e-143
axonal growth cone	Hs	cellular component	416	1.24e-124
apical part of cell	Hs	cellular component	408	6.77e-122
synapse	Hs	cellular component	468	2.94e-143
extracellular exosome	Hs	cellular component	408	6.77e-122
protein binding involved in heterotypic cell-cell adhesion	Hs	molecular function	468	2.94e-143

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	2.0E-33