Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

PBX1; PBX2; PBX3

Species

H.aurantium

Unique Gene ID

Haaura.g00010811

Gene Model ID

Haaura.CG.MTP2014.S4920.g10811

Location

S4920:2412..3843

Transcript Models and Sequences

  Haaura.CG.MTP2014.S4920.g10811.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom Pfam Homeobox domain
PBX Pfam PBX
Homeobox_dom CDD Homeobox domain
Homeobox_dom ProSiteProfiles Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
urogenital system development Hs biological process
branching involved in ureteric bud morphogenesis Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
steroid biosynthetic process Hs biological process
positive regulation of transcription of Notch receptor target Hs biological process
multicellular organism development Hs biological process
sex differentiation Hs biological process
transcription factor binding Hs molecular function
positive regulation of cell proliferation Hs biological process
adult locomotory behavior Hs biological process
animal organ morphogenesis Hs biological process
anterior/posterior pattern specification Hs biological process
proximal/distal pattern formation Hs biological process
positive regulation of G2/M transition of mitotic cell cycle Hs biological process
dorsal spinal cord development Hs biological process
cell differentiation Hs biological process
regulation of ossification Hs biological process
adrenal gland development Hs biological process
embryonic limb morphogenesis Hs biological process
somatic stem cell population maintenance Hs biological process
embryonic hemopoiesis Hs biological process
regulation of cell proliferation Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of neuron differentiation Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
protein heterodimerization activity Hs molecular function
thymus development Hs biological process
embryonic organ development Hs biological process
neuron development Hs biological process
embryonic skeletal system development Hs biological process
RNA polymerase II transcription factor complex Hs cellular component
XY body Hs cellular component
chromatin binding Hs molecular function
regulation of transcription from RNA polymerase II promoter Hs biological process
positive regulation of transcription, DNA-templated Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 288 1.72e-97
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 288 1.72e-97
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 291 3.14e-98
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 291 3.14e-98
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 288 1.72e-97
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 291 3.14e-98
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 282 7.14e-95
DNA binding Hs molecular function 291 3.14e-98
transcription factor activity, sequence-specific DNA binding Hs molecular function 291 3.14e-98
protein binding Hs molecular function 291 3.14e-98
nucleus Hs cellular component 291 3.14e-98
nucleoplasm Hs cellular component 288 1.72e-97
transcription factor complex Hs cellular component 291 3.14e-98
cytoplasm Hs cellular component 288 1.72e-97
transcription factor binding Hs molecular function 282 7.14e-95
sequence-specific DNA binding Hs molecular function 291 3.14e-98
protein heterodimerization activity Hs molecular function 288 1.72e-97
RNA polymerase II transcription factor complex Hs cellular component 288 1.72e-97

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 9.84E-11
transcription factor activity, sequence-specific DNA binding Pfam molecular function 1.5E-61
nucleus Pfam cellular component 1.5E-61

Back to Top