Aniseed - Gene card

Gene Card

Best human hits

MRPL44

Species

H.aurantium

Unique Gene ID

Haaura.g00005070

Gene Model ID

Haaura.CG.MTP2014.S438.g05070

Location

S438:45673..46907

Transcript Models and Sequences

Haaura.CG.MTP2014.S438.g05070.01.t
Haaura.CG.MTP2014.S438.g05070.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
RNase_III_sf	SUPERFAMILY	Ribonuclease III, endonuclease domain superfamily
dsRBD_dom	ProSiteProfiles	Double-stranded RNA-binding domain
RNase_III_sf	Gene3D	Ribonuclease III, endonuclease domain superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
double-stranded RNA binding	Hs	molecular function
nuclease activity	Hs	molecular function
endonuclease activity	Hs	molecular function
ribonuclease III activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
plasma membrane	Hs	cellular component
RNA processing	Hs	biological process
hydrolase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process
RNA phosphodiester bond hydrolysis	Hs	biological process
RNA phosphodiester bond hydrolysis, endonucleolytic	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	184	1.24e-55
double-stranded RNA binding	Hs	molecular function	184	1.24e-55
nuclease activity	Hs	molecular function	184	1.24e-55
endonuclease activity	Hs	molecular function	184	1.24e-55
ribonuclease III activity	Hs	molecular function	184	1.24e-55
protein binding	Hs	molecular function	184	1.24e-55
nucleus	Hs	cellular component	184	1.24e-55
mitochondrion	Hs	cellular component	184	1.24e-55
mitochondrial inner membrane	Hs	cellular component	184	1.24e-55
mitochondrial large ribosomal subunit	Hs	cellular component	184	1.24e-55
ribosome	Hs	cellular component	184	1.24e-55
plasma membrane	Hs	cellular component	184	1.24e-55
hydrolase activity	Hs	molecular function	184	1.24e-55
intracellular ribonucleoprotein complex	Hs	cellular component	184	1.24e-55

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
ribonuclease III activity	Gene3D	molecular function	2.4E-11
RNA processing	Gene3D	biological process	2.4E-11