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GENE CARD

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Gene Card

Best human hits

TRIM2; TRIM3; TRIM71

Species

H.aurantium

Unique Gene ID

Haaura.g00001095

Gene Model ID

Haaura.CG.MTP2014.S42.g01095

Location

S42:62982..72534

Transcript Models and Sequences

  Haaura.CG.MTP2014.S42.g01095.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
NHL_repeat_subgr ProSiteProfiles NHL repeat, subgroup
Znf_B-box SMART B-box-type zinc finger
Znf_RING_CS ProSitePatterns Zinc finger, RING-type, conserved site
Znf_B-box ProSiteProfiles B-box-type zinc finger
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_B-box Pfam B-box-type zinc finger
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING Pfam Zinc finger, RING-type
Znf_RING SMART Zinc finger, RING-type
NHL_repeat Pfam NHL repeat
Znf_B-box CDD B-box-type zinc finger

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 155 1.34e-38
RNA binding Hs molecular function 155 1.34e-38
ubiquitin-protein transferase activity Hs molecular function 161 6.93e-41
protein binding Hs molecular function 161 6.93e-41
intracellular Hs cellular component 161 6.93e-41
cytoplasm Hs cellular component 161 6.93e-41
endosome Hs cellular component 160 1.25e-40
early endosome Hs cellular component 160 1.25e-40
Golgi apparatus Hs cellular component 160 1.25e-40
protein C-terminus binding Hs molecular function 160 1.25e-40
zinc ion binding Hs molecular function 161 6.93e-41
transferase activity Hs molecular function 161 6.93e-41
translation repressor activity Hs molecular function 155 1.34e-38
dendrite Hs cellular component 160 1.25e-40
miRNA binding Hs molecular function 155 1.34e-38
cell projection Hs cellular component 160 1.25e-40
metal ion binding Hs molecular function 161 6.93e-41
ubiquitin protein ligase activity Hs molecular function 160 1.25e-40

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 3.1E-6
intracellular CDD cellular component 9.85832E-7
zinc ion binding CDD molecular function 9.85832E-7