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GENE CARD

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Gene Card

Best human hits

SFSWAP

Species

H.aurantium

Unique Gene ID

Haaura.g00004111

Gene Model ID

Haaura.CG.MTP2014.S299.g04111

Location

S299:5706..17548

Transcript Models and Sequences

  Haaura.CG.MTP2014.S299.g04111.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
SWAP/Surp_sf SUPERFAMILY SWAP/Surp superfamily
Surp ProSiteProfiles SWAP/Surp
SWAP/Surp_sf Gene3D SWAP/Surp superfamily
Surp SMART SWAP/Surp
Surp Pfam SWAP/Surp

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
alternative mRNA splicing, via spliceosome Hs biological process
mRNA 5'-splice site recognition Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
RNA processing Hs biological process
mRNA processing Hs biological process
RNA splicing Hs biological process
negative regulation of mRNA splicing, via spliceosome Hs biological process

GO (Blast)

3 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 143 2.97e-35
protein binding Hs molecular function 143 2.97e-35
nucleus Hs cellular component 143 2.97e-35

GO (InterProScan)

2 results

GO Term Analysis Type e-value
RNA binding Gene3D molecular function 6.1E-27
RNA processing Gene3D biological process 6.1E-27