Aniseed - Gene card

Gene 'Haaura.CG.MTP2014.S2...'

Gene Card

Best human hits

ITGA11; ITGA4; ITGA9

Species

H.aurantium

Unique Gene ID

Haaura.g00003965

Gene Model ID

Haaura.CG.MTP2014.S282.g03965

Location

S282:39046..50828

Transcript Models and Sequences

Haaura.CG.MTP2014.S282.g03965.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
Integrin_dom_sf	SUPERFAMILY	Integrin domain superfamily
Int_alpha_beta-p	ProSiteProfiles	Integrin alpha beta-propellor
Int_alpha_beta-p	SMART	Integrin alpha beta-propellor
Integrin_alpha	PRINTS	Integrin alpha chain
VWF_A	Pfam	von Willebrand factor, type A
VWF_A	ProSiteProfiles	von Willebrand factor, type A
Integrin_alpha_N	Gene3D	Integrin alpha, N-terminal
vWFA_dom_sf	Gene3D	von Willebrand factor A-like domain superfamily
VWF_A	SMART	von Willebrand factor, type A
FG-GAP	Pfam	FG-GAP repeat
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily
Integrin_alpha-2	Pfam	Integrin alpha-2

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
fibronectin binding	Hs	molecular function	210	3.02e-55
antigen binding	Hs	molecular function	210	3.02e-55
protein binding	Hs	molecular function	210	3.02e-55
collagen binding	Hs	molecular function	235	2.96e-63
plasma membrane	Hs	cellular component	235	2.96e-63
focal adhesion	Hs	cellular component	224	2.91e-59
integrin complex	Hs	cellular component	235	2.96e-63
basal plasma membrane	Hs	cellular component	235	2.96e-63
cell surface	Hs	cellular component	210	3.02e-55
coreceptor activity	Hs	molecular function	210	3.02e-55
membrane	Hs	cellular component	235	2.96e-63
integral component of membrane	Hs	cellular component	235	2.96e-63
C-X3-C chemokine binding	Hs	molecular function	210	3.02e-55
integrin alpha4-beta7 complex	Hs	cellular component	210	3.02e-55
integrin alpha9-beta1 complex	Hs	cellular component	235	2.96e-63
integrin alpha11-beta1 complex	Hs	cellular component	224	2.91e-59
collagen receptor activity	Hs	molecular function	224	2.91e-59
laminin binding	Hs	molecular function	235	2.96e-63
metal ion binding	Hs	molecular function	235	2.96e-63
cell adhesion molecule binding	Hs	molecular function	210	3.02e-55
extracellular exosome	Hs	cellular component	210	3.02e-55
collagen binding involved in cell-matrix adhesion	Hs	molecular function	224	2.91e-59
protein antigen binding	Hs	molecular function	210	3.02e-55

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
cell adhesion	PRINTS	biological process	2.0E-51
integrin complex	PRINTS	cellular component	2.0E-51