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GENE CARD

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Gene Card

Best human hits

PRPF40B; WAC

Species

H.aurantium

Unique Gene ID

Haaura.g00008394

Gene Model ID

Haaura.CG.MTP2014.S1472.g08394

Location

S1472:8786..13393

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WW_dom Pfam WW domain
WW_dom SMART WW domain
WW_dom CDD WW domain
WW_dom_sf SUPERFAMILY WW domain superfamily
WW_dom ProSiteProfiles WW domain
WW_dom ProSitePatterns WW domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core binding Hs molecular function 101 1.04e-22
chromatin binding Hs molecular function 101 1.04e-22
RNA binding Hs molecular function 38.9 0.008
protein binding Hs molecular function 101 1.04e-22
nucleus Hs cellular component 101 1.04e-22
nucleoplasm Hs cellular component 101 1.04e-22
spliceosomal complex Hs cellular component 101 1.04e-22
U1 snRNP Hs cellular component 38.9 0.008
nuclear speck Hs cellular component 101 1.04e-22
U2-type prespliceosome Hs cellular component 38.9 0.008

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding CDD molecular function 1.89861E-9