Aniseed - Gene card

Gene Card

Best human hits

POU4F1; POU4F2; POU4F3

Species

H.aurantium

Unique Gene ID

Haaura.g00007848

Gene Model ID

Haaura.CG.MTP2014.S1201.g07848

Location

S1201:7422..10704

Transcript Models and Sequences

Haaura.CG.MTP2014.S1201.g07848.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
POU_dom	ProSitePatterns	POU-specific domain
POU_dom	ProSiteProfiles	POU-specific domain
POU_dom	SMART	POU-specific domain
POU	PRINTS	POU domain
Lambda_DNA-bd_dom_sf	SUPERFAMILY	Lambda repressor-like, DNA-binding domain superfamily
POU_dom	Pfam	POU-specific domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	192	2.56e-57
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	216	2.28e-67
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	192	2.56e-57
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	216	2.28e-67
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	216	2.28e-67
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	193	1.47e-57
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	192	2.56e-57
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	216	2.28e-67
DNA binding	Hs	molecular function	216	2.28e-67
chromatin binding	Hs	molecular function	193	1.47e-57
single-stranded DNA binding	Hs	molecular function	192	2.56e-57
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	216	2.28e-67
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	192	2.56e-57
transcription coactivator activity	Hs	molecular function	193	1.47e-57
transcription corepressor activity	Hs	molecular function	193	1.47e-57
nucleus	Hs	cellular component	216	2.28e-67
nucleoplasm	Hs	cellular component	216	2.28e-67
cytoplasm	Hs	cellular component	216	2.28e-67
plasma membrane	Hs	cellular component	193	1.47e-57
membrane	Hs	cellular component	193	1.47e-57
nuclear speck	Hs	cellular component	193	1.47e-57
neuron projection	Hs	cellular component	192	2.56e-57
sequence-specific DNA binding	Hs	molecular function	216	2.28e-67
GTPase binding	Hs	molecular function	192	2.56e-57
promoter-specific chromatin binding	Hs	molecular function	193	1.47e-57

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	PRINTS	molecular function	5.0E-27
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	9.8E-49
regulation of transcription, DNA-templated	SMART	biological process	9.8E-49