Aniseed - Gene card

Gene 'Haaura.CG.MTP2014.S1...'

Gene Card

Best human hits

BARHL1; BARHL2; GBX2

Species

H.aurantium

Unique Gene ID

Haaura.g00007751

Gene Model ID

Haaura.CG.MTP2014.S1155.g07751

Location

S1155:1531..3032

Transcript Models and Sequences

Haaura.CG.MTP2014.S1155.g07751.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	CDD	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_dom	SMART	Homeobox domain
Homeobox_metazoa	PRINTS	Homeobox domain, metazoa
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox_dom	Pfam	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
neuron migration	Hs	biological process
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
sensory perception of sound	Hs	biological process
midbrain development	Hs	biological process
negative regulation of neuron apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	91.7	1.72e-20
RNA polymerase II core promoter sequence-specific DNA binding	Hs	molecular function	86.3	1.32e-18
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	91.7	1.72e-20
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	91.7	1.72e-20
transcriptional activator activity, RNA polymerase II transcription factor binding	Hs	molecular function	86.3	1.32e-18
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	91.7	1.72e-20
DNA binding	Hs	molecular function	91.7	1.72e-20
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	90.5	7.38e-20
protein binding	Hs	molecular function	90.5	7.38e-20
nucleus	Hs	cellular component	91.7	1.72e-20
sequence-specific DNA binding	Hs	molecular function	91.7	1.72e-20

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	1.0E-26
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function