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GENE CARD

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Gene Card

Best human hits

RNF139; RNF145; SYVN1

Species

C.savignyi

Unique Gene ID

Cisavi.g00011434

Gene Model ID

Cisavi.CG.ENS81.R91.523142-526333

Location

R91:523141..526333

Transcript Models and Sequences

  Cisavi.CG.ENS81.R91.523142-526333.01454.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TRC8_N_dom Pfam TRC8 N-terminal domain
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING Pfam Zinc finger, RING-type
Znf_RING SMART Zinc finger, RING-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
zinc ion binding Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
metal ion binding Hs molecular function
ubiquitin protein ligase activity Hs molecular function

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Hrd1p ubiquitin ligase complex Hs cellular component 61.6 1.03e-11
Hrd1p ubiquitin ligase ERAD-L complex Hs cellular component 61.6 1.03e-11
protease binding Hs molecular function 117 2.56e-31
ubiquitin-protein transferase activity Hs molecular function 117 2.56e-31
receptor activity Hs molecular function 117 2.56e-31
protein binding Hs molecular function 117 2.56e-31
nucleoplasm Hs cellular component 61.6 1.03e-11
endoplasmic reticulum Hs cellular component 117 2.56e-31
endoplasmic reticulum membrane Hs cellular component 117 2.56e-31
smooth endoplasmic reticulum Hs cellular component 61.6 1.03e-11
zinc ion binding Hs molecular function 132 1.72e-36
membrane Hs cellular component 132 1.72e-36
integral component of membrane Hs cellular component 132 1.72e-36
transferase activity Hs molecular function 117 2.56e-31
ligase activity Hs molecular function 117 2.56e-31
ubiquitin-like protein transferase activity Hs molecular function 117 2.56e-31
integral component of endoplasmic reticulum membrane Hs cellular component 61.6 1.03e-11
Derlin-1 retrotranslocation complex Hs cellular component 117 2.56e-31
endoplasmic reticulum quality control compartment Hs cellular component 117 2.56e-31
metal ion binding Hs molecular function 132 1.72e-36
unfolded protein binding Hs molecular function 61.6 1.03e-11
chaperone binding Hs molecular function 61.6 1.03e-11
ATPase binding Hs molecular function 61.6 1.03e-11
ubiquitin protein ligase activity Hs molecular function 132 1.72e-36
ubiquitin protein ligase activity involved in ERAD pathway Hs molecular function 117 2.56e-31
ubiquitin-specific protease binding Hs molecular function 61.6 1.03e-11

GO (InterProScan)

No result

GO Term Analysis Type e-value