Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

FCN2; FIBCD1; TNR

Species

C.savignyi

Unique Gene ID

Cisavi.g00011386

Gene Model ID

Cisavi.CG.ENS81.R91.1103258-1105734

Location

R91:1103257..1105734

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Fibrinogen_a/b/g_C_dom SMART Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_CS ProSitePatterns Fibrinogen, conserved site
Fibrinogen_a/b/g_C_dom CDD Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C SUPERFAMILY Fibrinogen-like, C-terminal
Fibrinogen_a/b/g_C_dom ProSiteProfiles Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_1 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
Fibrinogen_a/b/g_C_2 Gene3D Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2
Fibrinogen_a/b/g_C_dom Pfam Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Collagen Pfam Collagen triple helix repeat

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
complement activation, lectin pathway Hs biological process
immune system process Hs biological process
antigen binding Hs molecular function
serine-type endopeptidase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
collagen trimer Hs cellular component
proteolysis Hs biological process
complement activation Hs biological process
membrane Hs cellular component
carbohydrate binding Hs molecular function
proteoglycan binding Hs molecular function
recognition of apoptotic cell Hs biological process
innate immune response Hs biological process
metal ion binding Hs molecular function
calcium-dependent protein binding Hs molecular function
defense response to Gram-negative bacterium Hs biological process
defense response to Gram-positive bacterium Hs biological process
extracellular exosome Hs cellular component
blood microparticle Hs cellular component
mannan binding Hs molecular function
G-protein coupled receptor binding Hs molecular function
plasma membrane Hs cellular component
G-protein coupled receptor signaling pathway Hs biological process
signaling pattern recognition receptor activity Hs molecular function
extrinsic component of external side of plasma membrane Hs cellular component
sialic acid binding Hs molecular function
protein localization to cell surface Hs biological process
secretory granule lumen Hs cellular component
defense response to virus Hs biological process
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
antigen binding Hs molecular function 183 1.47e-55
serine-type endopeptidase activity Hs molecular function 183 1.47e-55
protein binding Hs molecular function 206 1.46e-59
extracellular region Hs cellular component 206 1.46e-59
proteinaceous extracellular matrix Hs cellular component 206 1.46e-59
collagen trimer Hs cellular component 183 1.47e-55
chitin binding Hs molecular function 189 1.73e-56
cell surface Hs cellular component 206 1.46e-59
membrane Hs cellular component 189 1.73e-56
integral component of membrane Hs cellular component 189 1.73e-56
carbohydrate binding Hs molecular function 183 1.47e-55
proteoglycan binding Hs molecular function 183 1.47e-55
membrane raft Hs cellular component 206 1.46e-59
metal ion binding Hs molecular function 189 1.73e-56
calcium-dependent protein binding Hs molecular function 183 1.47e-55
extracellular exosome Hs cellular component 183 1.47e-55
perineuronal net Hs cellular component 206 1.46e-59
blood microparticle Hs cellular component 183 1.47e-55
mannan binding Hs molecular function 183 1.47e-55

GO (InterProScan)

No result

GO Term Analysis Type e-value