Aniseed - Gene card

Gene Card

Best human hits

ACTA1; ACTL6A; ACTL6B

Species

C.savignyi

Unique Gene ID

Cisavi.g00011371

Gene Model ID

Cisavi.CG.ENS81.R90.512214-513868

Location

R90:512213..513868

Transcript Models and Sequences

Cisavi.CG.ENS81.R90.512214-513868.17066.t
Cisavi.CG.ENS81.R90.512214-513868.17067.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Actin	PRINTS	Actin family
Actin	PANTHER	Actin family
Actin	Pfam	Actin family
Actin	SMART	Actin family
Actin_CS	ProSitePatterns	Actin, conserved site

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear chromatin	Hs	cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
neural retina development	Hs	biological process
chromatin binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
plasma membrane	Hs	cellular component
DNA repair	Hs	biological process
DNA recombination	Hs	biological process
chromatin organization	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
cytoskeleton organization	Hs	biological process
signal transduction	Hs	biological process
nervous system development	Hs	biological process
SWI/SNF complex	Hs	cellular component
protein deubiquitination	Hs	biological process
spinal cord development	Hs	biological process
Ino80 complex	Hs	cellular component
nucleosomal DNA binding	Hs	molecular function
macromolecular complex	Hs	cellular component
NuA4 histone acetyltransferase complex	Hs	cellular component
regulation of growth	Hs	biological process
ATP-dependent chromatin remodeling	Hs	biological process
histone H4 acetylation	Hs	biological process
histone H2A acetylation	Hs	biological process
npBAF complex	Hs	cellular component
nBAF complex	Hs	cellular component

GO (Blast)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	230	6.01e-72
nuclear chromatin	Hs	cellular component	567	0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	567	0.0
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	567	0.0
stress fiber	Hs	cellular component	230	6.01e-72
chromatin binding	Hs	molecular function	567	0.0
transcription coactivator activity	Hs	molecular function	575	0.0
structural constituent of cytoskeleton	Hs	molecular function	575	0.0
protein binding	Hs	molecular function	567	0.0
ATP binding	Hs	molecular function	230	6.01e-72
extracellular space	Hs	cellular component	230	6.01e-72
nucleus	Hs	cellular component	575	0.0
nucleoplasm	Hs	cellular component	567	0.0
nucleolus	Hs	cellular component	575	0.0
cytoplasm	Hs	cellular component	230	6.01e-72
cytosol	Hs	cellular component	230	6.01e-72
cytoskeleton	Hs	cellular component	230	6.01e-72
striated muscle thin filament	Hs	cellular component	230	6.01e-72
actin filament	Hs	cellular component	230	6.01e-72
plasma membrane	Hs	cellular component	567	0.0
actin cytoskeleton	Hs	cellular component	230	6.01e-72
SWI/SNF complex	Hs	cellular component	575	0.0
myosin binding	Hs	molecular function	230	6.01e-72
sarcomere	Hs	cellular component	230	6.01e-72
lamellipodium	Hs	cellular component	230	6.01e-72
filopodium	Hs	cellular component	230	6.01e-72
Ino80 complex	Hs	cellular component	567	0.0
nucleosomal DNA binding	Hs	molecular function	567	0.0
macromolecular complex	Hs	cellular component	567	0.0
NuA4 histone acetyltransferase complex	Hs	cellular component	567	0.0
ADP binding	Hs	molecular function	230	6.01e-72
cell body	Hs	cellular component	230	6.01e-72
extracellular exosome	Hs	cellular component	230	6.01e-72
npBAF complex	Hs	cellular component	567	0.0
nBAF complex	Hs	cellular component	575	0.0
blood microparticle	Hs	cellular component	230	6.01e-72

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value