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GENE CARD

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  1. Gene 'Cisavi.CG.ENS81.R9.3...'

Gene Card

Best human hits

PRDM1; ZNF235; ZNF683

Species

C.savignyi

Unique Gene ID

Cisavi.g00011277

Gene Model ID

Cisavi.CG.ENS81.R9.3393805-3395292

Location

R9:3393804..3395292

Transcript Models and Sequences

  Cisavi.CG.ENS81.R9.3393805-3395292.19181.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 182 2.49e-54
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 182 2.49e-54
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 182 2.49e-54
nucleic acid binding Hs molecular function 182 2.49e-54
DNA binding Hs molecular function 182 2.49e-54
transcription factor activity, sequence-specific DNA binding Hs molecular function 182 2.49e-54
protein binding Hs molecular function 182 2.49e-54
intracellular Hs cellular component 108 1.74e-28
nucleus Hs cellular component 182 2.49e-54
nucleoplasm Hs cellular component 182 2.49e-54
cytoplasm Hs cellular component 182 2.49e-54
methyltransferase activity Hs molecular function 182 2.49e-54
transferase activity Hs molecular function 182 2.49e-54
histone deacetylase binding Hs molecular function 182 2.49e-54
sequence-specific DNA binding Hs molecular function 182 2.49e-54
metal ion binding Hs molecular function 182 2.49e-54
promoter-specific chromatin binding Hs molecular function 182 2.49e-54

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 6.0E-4