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GENE CARD

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Gene Card

Best human hits

FBXO11; UBR4; UBR5

Species

C.savignyi

Unique Gene ID

Cisavi.g00010996

Gene Model ID

Cisavi.CG.ENS81.R85.281353-299639

Location

R85:281352..299639

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
E3_UbLigase_EDD_UBA CDD E3 ubiquitin ligase EDD, ubiquitin-associated domain
Znf_UBR ProSiteProfiles Zinc finger, UBR-type
Znf_UBR SMART Zinc finger, UBR-type
E3_UbLigase_EDD_UBA Pfam E3 ubiquitin ligase EDD, ubiquitin-associated domain
RCC1/BLIP-II SUPERFAMILY Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 47.8 5.02e-05
RNA binding Hs molecular function 462 7.66e-137
ubiquitin-protein transferase activity Hs molecular function 462 7.66e-137
binding Hs molecular function 60.8 5.34e-09
protein binding Hs molecular function 462 7.66e-137
calmodulin binding Hs molecular function 60.8 5.34e-09
nucleus Hs cellular component 462 7.66e-137
nucleoplasm Hs cellular component 462 7.66e-137
chromosome Hs cellular component 47.8 5.02e-05
nucleolus Hs cellular component 47.8 5.02e-05
cytoplasm Hs cellular component 60.8 5.34e-09
centrosome Hs cellular component 60.8 5.34e-09
cytosol Hs cellular component 462 7.66e-137
cytoskeleton Hs cellular component 60.8 5.34e-09
plasma membrane Hs cellular component 60.8 5.34e-09
zinc ion binding Hs molecular function 462 7.66e-137
membrane Hs cellular component 462 7.66e-137
integral component of membrane Hs cellular component 60.8 5.34e-09
protein-arginine N-methyltransferase activity Hs molecular function 47.8 5.02e-05
transferase activity Hs molecular function 462 7.66e-137
macromolecular complex Hs cellular component 462 7.66e-137
ubiquitin-ubiquitin ligase activity Hs molecular function 462 7.66e-137
specific granule membrane Hs cellular component 60.8 5.34e-09
ubiquitin binding Hs molecular function 462 7.66e-137
metal ion binding Hs molecular function 462 7.66e-137
perinuclear region of cytoplasm Hs cellular component 462 7.66e-137
ubiquitin protein ligase activity Hs molecular function 462 7.66e-137
tertiary granule membrane Hs cellular component 60.8 5.34e-09
ficolin-1-rich granule membrane Hs cellular component 60.8 5.34e-09

GO (InterProScan)

2 results

GO Term Analysis Type e-value
zinc ion binding SMART molecular function 1.5E-21
ubiquitin binding Pfam molecular function 9.3E-30