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GENE CARD

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Gene Card

Best human hits

RAB7A; RAB9A; RAB9B

Species

C.savignyi

Unique Gene ID

Cisavi.g00009741

Gene Model ID

Cisavi.CG.ENS81.R64.146209-153050

Location

R64:146208..153050

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTPase Pfam Small GTPase superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
nucleotide binding Hs molecular function
autophagosome membrane Hs cellular component
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
cytoplasm Hs cellular component
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endosome Hs cellular component
late endosome Hs cellular component
Golgi apparatus Hs cellular component
lipid droplet Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
protein targeting to lysosome Hs biological process
lipid metabolic process Hs biological process
endocytosis Hs biological process
autophagy Hs biological process
endosome to lysosome transport Hs biological process
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
lipid catabolic process Hs biological process
GDP binding Hs molecular function
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
protein to membrane docking Hs biological process
secretory granule membrane Hs cellular component
phagocytic vesicle membrane Hs cellular component
retromer complex Hs cellular component
cytoplasmic vesicle Hs cellular component
late endosome membrane Hs cellular component
extrinsic component of lysosome membrane Hs cellular component
melanosome membrane Hs cellular component
pre-autophagosomal structure membrane Hs cellular component
retrograde transport, endosome to Golgi Hs biological process
terminal bouton Hs cellular component
early endosome to late endosome transport Hs biological process
phagocytic vesicle Hs cellular component
bone resorption Hs biological process
positive regulation of protein catabolic process Hs biological process
Rac GTPase binding Hs molecular function
extracellular exosome Hs cellular component
phagosome maturation Hs biological process
phagosome acidification Hs biological process
phagosome-lysosome fusion Hs biological process
alveolar lamellar body Hs cellular component
retromer complex binding Hs molecular function

GO (Blast)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 195 2.54e-63
nucleotide binding Hs molecular function 350 1.70e-124
autophagosome membrane Hs cellular component 350 1.70e-124
GTPase activity Hs molecular function 350 1.70e-124
protein binding Hs molecular function 350 1.70e-124
GTP binding Hs molecular function 350 1.70e-124
cytoplasm Hs cellular component 350 1.70e-124
lysosome Hs cellular component 350 1.70e-124
lysosomal membrane Hs cellular component 350 1.70e-124
endosome Hs cellular component 350 1.70e-124
late endosome Hs cellular component 350 1.70e-124
endoplasmic reticulum Hs cellular component 195 2.54e-63
endoplasmic reticulum membrane Hs cellular component 195 2.54e-63
Golgi apparatus Hs cellular component 350 1.70e-124
lipid droplet Hs cellular component 350 1.70e-124
cytosol Hs cellular component 350 1.70e-124
plasma membrane Hs cellular component 350 1.70e-124
endosome membrane Hs cellular component 350 1.70e-124
membrane Hs cellular component 350 1.70e-124
GDP binding Hs molecular function 350 1.70e-124
transport vesicle Hs cellular component 195 2.54e-63
cytoplasmic vesicle membrane Hs cellular component 195 2.54e-63
secretory granule membrane Hs cellular component 350 1.70e-124
phagocytic vesicle membrane Hs cellular component 350 1.70e-124
retromer complex Hs cellular component 350 1.70e-124
cytoplasmic vesicle Hs cellular component 350 1.70e-124
late endosome membrane Hs cellular component 350 1.70e-124
extrinsic component of lysosome membrane Hs cellular component 350 1.70e-124
trans-Golgi network membrane Hs cellular component 195 2.54e-63
melanosome membrane Hs cellular component 350 1.70e-124
pre-autophagosomal structure membrane Hs cellular component 350 1.70e-124
melanosome Hs cellular component 195 2.54e-63
identical protein binding Hs molecular function 195 2.54e-63
terminal bouton Hs cellular component 350 1.70e-124
phagocytic vesicle Hs cellular component 350 1.70e-124
Rac GTPase binding Hs molecular function 350 1.70e-124
extracellular exosome Hs cellular component 350 1.70e-124
alveolar lamellar body Hs cellular component 350 1.70e-124
retromer complex binding Hs molecular function 350 1.70e-124

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 2.8E-58
GTP binding Pfam molecular function 2.8E-58