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GENE CARD

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Gene Card

Best human hits

TUBA1C; TUBA3C; TUBA3D

Species

C.savignyi

Unique Gene ID

Cisavi.g00009356

Gene Model ID

Cisavi.CG.ENS81.R58.1101765-1103770

Location

R58:1101764..1103770

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Tubulin_CS ProSitePatterns Tubulin, conserved site
Alpha_tubulin PRINTS Alpha tubulin
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin_C Gene3D Tubulin, C-terminal
Tubulin PANTHER Tubulin
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin PRINTS Tubulin

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cytoskeleton organization Hs biological process
microtubule-based process Hs biological process
microtubule cytoskeleton Hs cellular component

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 868 0.0
GTPase activity Hs molecular function 868 0.0
structural molecule activity Hs molecular function 865 0.0
structural constituent of cytoskeleton Hs molecular function 868 0.0
protein binding Hs molecular function 868 0.0
GTP binding Hs molecular function 868 0.0
nucleus Hs cellular component 868 0.0
cytoplasm Hs cellular component 868 0.0
cytoskeleton Hs cellular component 868 0.0
microtubule Hs cellular component 868 0.0
microtubule cytoskeleton Hs cellular component 868 0.0
vesicle Hs cellular component 865 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 3.6E-51
structural constituent of cytoskeleton PRINTS molecular function 1.7E-76
GTP binding PRINTS molecular function 1.7E-76
microtubule PANTHER cellular component 2.7E-280
microtubule-based process PANTHER biological process 2.7E-280