Aniseed - Gene card

Gene 'Cisavi.CG.ENS81.R54....'

Gene Card

Best human hits

SLC6A1; SLC6A12; SLC6A13

Species

C.savignyi

Unique Gene ID

Cisavi.g00008953

Gene Model ID

Cisavi.CG.ENS81.R54.1622068-1633688

Location

R54:1622067..1633688

Transcript Models and Sequences

Cisavi.CG.ENS81.R54.1622068-1633688.14744.t
Cisavi.CG.ENS81.R54.1622068-1633688.14745.t
Cisavi.CG.ENS81.R54.1622068-1633688.14746.t
Cisavi.CG.ENS81.R54.1622068-1633688.14747.t
Cisavi.CG.ENS81.R54.1622068-1633688.14748.t
Cisavi.CG.ENS81.R54.1622068-1633688.14749.t
Cisavi.CG.ENS81.R54.1622068-1633688.14750.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Na/ntran_symport	PRINTS	Sodium:neurotransmitter symporter
Na/ntran_symport	Pfam	Sodium:neurotransmitter symporter
Na/ntran_symport	ProSiteProfiles	Sodium:neurotransmitter symporter
SNS_sf	SUPERFAMILY	Sodium:neurotransmitter symporter superfamily
Na/ntran_symport	PANTHER	Sodium:neurotransmitter symporter

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transporter activity	Hs	molecular function	403	6.50e-134
neurotransmitter:sodium symporter activity	Hs	molecular function	414	2.74e-138
gamma-aminobutyric acid:sodium symporter activity	Hs	molecular function	414	2.74e-138
protein binding	Hs	molecular function	394	5.06e-130
plasma membrane	Hs	cellular component	414	2.74e-138
integral component of plasma membrane	Hs	cellular component	414	2.74e-138
cell surface	Hs	cellular component	414	2.74e-138
amino acid transmembrane transporter activity	Hs	molecular function	394	5.06e-130
symporter activity	Hs	molecular function	414	2.74e-138
membrane	Hs	cellular component	414	2.74e-138
integral component of membrane	Hs	cellular component	414	2.74e-138
axon	Hs	cellular component	414	2.74e-138
neuron projection	Hs	cellular component	414	2.74e-138
metal ion binding	Hs	molecular function	414	2.74e-138
extracellular exosome	Hs	cellular component	403	6.50e-134

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
neurotransmitter:sodium symporter activity	PANTHER	molecular function	4.5E-194
neurotransmitter transport	PANTHER	biological process	4.5E-194
integral component of membrane	PANTHER	cellular component	4.5E-194